Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118958193 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 48028238 ~ 48029697 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005047278.1 | True | 1204 | mRNA | 0.31 | 2 | 48028238 | 48029697 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520067 | LOC106586186 | coding | upstream | 1153 | 47981052 ~ 48027085 (+) |
| LOC110520066 | LOC106586185 | coding | upstream | 51400 | 47971973 ~ 47976838 (+) |
| LOC110520065 | LOC106586184 | coding | upstream | 80210 | 47929321 ~ 47948028 (+) |
| LOC118958036 | NA | coding | upstream | 176333 | 47847053 ~ 47851905 (+) |
| LOC110520058 | tanc1 | coding | upstream | 303395 | 47447377 ~ 47724843 (+) |
| LOC110520075 | LOC106586196 | coding | downstream | 425513 | 48455210 ~ 48508839 (+) |
| LOC110504158 | LOC106903880 | coding | downstream | 513323 | 48542999 ~ 48563667 (+) |
| LOC110520076 | LOC106586200 | coding | downstream | 532954 | 48562651 ~ 48577839 (+) |
| LOC110520080 | LOC106581709 | coding | downstream | 615413 | 48645110 ~ 48667115 (+) |
| LOC110520081 | LOC106581793 | coding | downstream | 642343 | 48672040 ~ 48795272 (+) |
| G265811 | NA | non-coding | upstream | 99822 | 47928210 ~ 47928416 (+) |
| G265810 | NA | non-coding | upstream | 100048 | 47927887 ~ 47928190 (+) |
| G265809 | NA | non-coding | upstream | 100985 | 47927018 ~ 47927253 (+) |
| G265805 | NA | non-coding | upstream | 105120 | 47922759 ~ 47923118 (+) |
| G265795 | NA | non-coding | upstream | 115138 | 47912893 ~ 47913100 (+) |
| G265851 | NA | non-coding | downstream | 2342 | 48032039 ~ 48032977 (+) |
| G266299 | NA | non-coding | downstream | 47549 | 48077246 ~ 48077691 (+) |
| G266300 | NA | non-coding | downstream | 48058 | 48077755 ~ 48078999 (+) |
| G266478 | NA | non-coding | downstream | 174262 | 48203959 ~ 48204325 (+) |
| G266524 | NA | non-coding | downstream | 204272 | 48233969 ~ 48234915 (+) |
| LOC110520046 | LOC106586167 | other | upstream | 1195994 | 46801058 ~ 46832288 (+) |
| G263859 | LOC107588258 | other | upstream | 1843434 | 46184134 ~ 46184804 (+) |
| G263733 | LOC106586158 | other | upstream | 1948813 | 46075484 ~ 46079425 (+) |
| G263710 | NA | other | upstream | 2093820 | 45934119 ~ 45934418 (+) |
| G263547 | LOC106586150 | other | upstream | 2188758 | 45838921 ~ 45839480 (+) |
| G267358 | NA | other | downstream | 1481106 | 49510803 ~ 49512475 (+) |
| G267381 | NA | other | downstream | 1524801 | 49554498 ~ 49555838 (+) |
| G267529 | NA | other | downstream | 1806920 | 49836617 ~ 49855502 (+) |
| hoxd3a | hoxd3 | other | downstream | 2132604 | 50162278 ~ 50184327 (+) |
| LOC110520146 | ino80d | other | downstream | 2572605 | 50601983 ~ 50618761 (+) |
