Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118958036 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 47847053 ~ 47851905 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005047120.1 | True | 719 | mRNA | 0.40 | 3 | 47847053 | 47851905 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520058 | tanc1 | coding | upstream | 122210 | 47447377 ~ 47724843 (+) |
| LOC110520057 | dal1b | coding | upstream | 401842 | 47442506 ~ 47445211 (+) |
| LOC110520056 | LOC106586174 | coding | upstream | 405130 | 47315217 ~ 47441923 (+) |
| LOC110520054 | LOC106586173 | coding | upstream | 587734 | 47256164 ~ 47259319 (+) |
| LOC110520055 | cg057 | coding | upstream | 591955 | 47245494 ~ 47255098 (+) |
| LOC110520065 | LOC106586184 | coding | downstream | 77416 | 47929321 ~ 47948028 (+) |
| LOC110520066 | LOC106586185 | coding | downstream | 120068 | 47971973 ~ 47976838 (+) |
| LOC110520067 | LOC106586186 | coding | downstream | 129147 | 47981052 ~ 48027085 (+) |
| LOC118958193 | NA | coding | downstream | 176333 | 48028238 ~ 48029697 (+) |
| LOC110520075 | LOC106586196 | coding | downstream | 603305 | 48455210 ~ 48508839 (+) |
| G265670 | NA | non-coding | upstream | 95982 | 47749631 ~ 47751071 (+) |
| G265682 | NA | non-coding | upstream | 119136 | 47727110 ~ 47727917 (+) |
| G265634 | NA | non-coding | upstream | 242400 | 47604340 ~ 47604653 (+) |
| G265621 | NA | non-coding | upstream | 261004 | 47585828 ~ 47586049 (+) |
| G265620 | NA | non-coding | upstream | 261419 | 47585349 ~ 47585634 (+) |
| G265759 | NA | non-coding | downstream | 256 | 47852161 ~ 47852393 (+) |
| G265761 | NA | non-coding | downstream | 2837 | 47854742 ~ 47854946 (+) |
| G265763 | LOC106586182 | non-coding | downstream | 5471 | 47857376 ~ 47861453 (+) |
| G265795 | NA | non-coding | downstream | 60988 | 47912893 ~ 47913100 (+) |
| G265805 | NA | non-coding | downstream | 70854 | 47922759 ~ 47923118 (+) |
| LOC110520046 | LOC106586167 | other | upstream | 1014809 | 46801058 ~ 46832288 (+) |
| G263859 | LOC107588258 | other | upstream | 1662249 | 46184134 ~ 46184804 (+) |
| G263733 | LOC106586158 | other | upstream | 1767628 | 46075484 ~ 46079425 (+) |
| G263710 | NA | other | upstream | 1912635 | 45934119 ~ 45934418 (+) |
| G263547 | LOC106586150 | other | upstream | 2007573 | 45838921 ~ 45839480 (+) |
| G267358 | NA | other | downstream | 1658898 | 49510803 ~ 49512475 (+) |
| G267381 | NA | other | downstream | 1702593 | 49554498 ~ 49555838 (+) |
| G267529 | NA | other | downstream | 1984712 | 49836617 ~ 49855502 (+) |
| hoxd3a | hoxd3 | other | downstream | 2310396 | 50162278 ~ 50184327 (+) |
| LOC110520146 | ino80d | other | downstream | 2750397 | 50601983 ~ 50618761 (+) |
