LOC110520057 (dal1b)


Basic Information

Item Value
gene id LOC110520057
gene name dal1b
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 47442506 ~ 47445211 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021597041.2
AGGGGCGTGGCTGGAGGTTGTTTTTGAACTAGGCAATGGTGTCGAATAAATGACAGAATTGGTAGATAAGAAGTAGGATTAGATCATGAACATCCTCAATGAGCACCATGCACACGAATGCGCCGATCTATACACTGAATGGATAGAACATGCAAGTTGTTGAAACTGTTCACTCCATATTTCTGGTTCACTCATGTGGAATACATGAGTCTGCTGCAGCCTCATGCTGCTGATGCTCGCTTCCTGCGTAAACTAAGTCATTTGCCTTTCAGCAGTATAAAGTGGGCGTTGTAGTACTTTGTGTGCCGTTATTGTTGTTCAGAAGTCGAGAATGGTGCAACTATCTAAatctggagtgagagagagtccTGAATTGAAGGCTGGCCATCCTCCAGCAGTGAAGGCTGGGGGGAAACGAGTGGTCAAGAAAAGCTGTGAGGAGAGTCATGCCACCCACCATGTGAACCCAGAGAGGGAACACAAAGTTCCCAAACCCAGATCTGCAGCCACCTCCAGCAGAATGCAGCAAATCAGTGTCTTGATGTCAGGAACACTTGACAAGTTGGGACATGACTTCCCAGAGACCCCAGTAAGTGTGAAGCACAGCAGACTCAGACCTGCTATGGAGAAGGCACACTCGCCAGCTTTCAAGTCCAGCTTCTGCATCCAGCAACCCAAAAAGTTCTGAAGCAGCGTGTTGAAGTTGCCCGAGGGGAAACGTGAAGTCGTCTGTGAAAGACCAACAGGATGTGTTAGTTATATGCATGAGGGGACCGACATGAGATATCAGAAAATACTTTAATGTTTAACTTTCTTGATTTAATGTAGAATCAATTTGGCTTTTAATTAGTTGCAATTTGTGACTTTGCTACTTTTAGGTGAGAAAGTGGAGCTTTGCAGGGATATAGTGGGTTTTCAGCTTATTCCAAACCAGCACTTACTgtgccttaaaaaaaaaaattatgaatgAGACATCCTGTGAACTAAAGGCACAGATGGTGGGCATTTTTGAAATGGTATGTTGCATAAGTGGGTAAAAGCTGGATGACTGACTTTTGTCATTGAATGTTTTAATAGTGAGAAGCTTGAATAATACAAAAAAACTGCATGTCATTAAACATTTTGTCTTCTGTTTTTTTATGGTTACTTCTAGATTCCCATGATTAAATAAAATGCAATTAATGAA
>TU301557
GAGTCTGCTGCAGCCTCATGCTGCTGATGCTCGCTTCCTGCGTAAACTAAGTCATTTGCCTTTCAGCAGTATAAAGTGGGCGTTGTAGTACTTTGTGTGCCGTTATTGTTGTTCAGAAGTCGAGAATGGTGCAACTATCTAAatctggagtgagagagagtccTGAATTGAAGGCTGGCCATCCTCCAGCAGTGAAGGCTGGGGGGAAACGAGTGGTCAAGAAAAGCTGTGAGGAGAGTCATGCCACCCACCATGTGAACCCAGAGAGGGAACACAAAGTTCCCAAACCCAGATCTGCAGCCACCTCCAGCAGAATGCAGCAAATCAGTGTCTTGATGTCAGGAACACTTGACAAGAGACCCCAGTAAGTGTGAAGCACAGCAGACTCAGACCTGCTATGGAGAAGGCACACTCGCCAGCTTTCAAGTCCAGCTTCTGCATCCAGCAACCCAAAAAGTTCTGAAGCAGCGTGTTGAAGTTGCCCGAGGGGAAACGTGAAGTCGTCTGTGAAAGACCAACAGGATGTGTTAGTTATATGCATGAGGGGACCGACATGAGATATCAGAAAATACTTTAATGTTTAACTTTCTTGATTTAATGTAGAATCAATTTGGCTTTTAATTAGTTGCAATTTGTGACTTTGCTACTTTTAGGTGAGAAAGTGGAGCTTTGCAGGGATATAGTGGGTTTTCAGCTTATTCCAAACCAGCACTTACTgtgccttaaaaaaaaaaattatgaatgAGACATCCTGTGAACTAAAGGCACAGATGGTGGGCATTTTTGAAATGGTATGTTGCATAAGTGGGTAAAAGCTGGATGACTGACTTTTGTCATTGAATGTTTTAATAGTGAGAAGCTTGAATAATACAAAAAAACTGCATGTCATTAAACATTTTGTCTTCTGTTTTTTTATGGTTACTTCTAGATTCCCATGATTAAATAAAATGCAATTAATGAA

Function

NR:

description
death-associated protein-like 1-A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021597041.2 False 1186 mRNA 0.42 4 47442506 47445211
TU301557 True 961 lncRNA 0.42 4 47442712 47445211

Neighbor

gene id symbol gene type direction distance location
LOC110520056 LOC106586174 coding upstream 583 47315217 ~ 47441923 (+)
LOC110520054 LOC106586173 coding upstream 183187 47256164 ~ 47259319 (+)
LOC110520055 cg057 coding upstream 187408 47245494 ~ 47255098 (+)
LOC110520048 LOC106586169 coding upstream 309204 47118728 ~ 47133302 (+)
LOC110504153 gpd2 coding upstream 414560 47020995 ~ 47027946 (+)
LOC110520058 tanc1 coding downstream 2166 47447377 ~ 47724843 (+)
LOC118958036 NA coding downstream 401842 47847053 ~ 47851905 (+)
LOC110520065 LOC106586184 coding downstream 484110 47929321 ~ 47948028 (+)
LOC110520066 LOC106586185 coding downstream 526762 47971973 ~ 47976838 (+)
LOC110520067 LOC106586186 coding downstream 535841 47981052 ~ 48027085 (+)
G265120 NA non-coding upstream 256885 47184571 ~ 47185621 (+)
G265152 NA non-coding upstream 264871 47175948 ~ 47177635 (+)
G265150 NA non-coding upstream 267346 47174873 ~ 47175160 (+)
G265148 NA non-coding upstream 269688 47172506 ~ 47172818 (+)
G265577 NA non-coding downstream 35031 47480242 ~ 47480460 (+)
G265620 NA non-coding downstream 140138 47585349 ~ 47585634 (+)
G265621 NA non-coding downstream 140617 47585828 ~ 47586049 (+)
G265634 NA non-coding downstream 159129 47604340 ~ 47604653 (+)
G265682 NA non-coding downstream 281899 47727110 ~ 47727917 (+)
LOC110520046 LOC106586167 other upstream 610262 46801058 ~ 46832288 (+)
G263859 LOC107588258 other upstream 1257702 46184134 ~ 46184804 (+)
G263733 LOC106586158 other upstream 1363081 46075484 ~ 46079425 (+)
G263710 NA other upstream 1508088 45934119 ~ 45934418 (+)
G263547 LOC106586150 other upstream 1603026 45838921 ~ 45839480 (+)
G267358 NA other downstream 2065592 49510803 ~ 49512475 (+)
G267381 NA other downstream 2109287 49554498 ~ 49555838 (+)
G267529 NA other downstream 2391406 49836617 ~ 49855502 (+)
hoxd3a hoxd3 other downstream 2717090 50162278 ~ 50184327 (+)
LOC110520146 ino80d other downstream 3157091 50601983 ~ 50618761 (+)

Expression


Co-expression Network