Gene
RNA
| Item | Value |
|---|---|
| gene id | G265152 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 47175948 ~ 47177635 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: activin receptor type-1C |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU301380 | True | 878 | lncRNA | 0.43 | 2 | 47175948 | 47177635 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520048 | LOC106586169 | coding | upstream | 42646 | 47118728 ~ 47133302 (+) |
| LOC110504153 | gpd2 | coding | upstream | 148002 | 47020995 ~ 47027946 (+) |
| LOC110520046 | LOC106586167 | coding | upstream | 343660 | 46801058 ~ 46832288 (+) |
| LOC110520045 | LOC106586166 | coding | upstream | 398556 | 46724055 ~ 46777392 (+) |
| LOC110504152 | LOC106586162 | coding | upstream | 631653 | 46458590 ~ 46544295 (+) |
| LOC110520055 | cg057 | coding | downstream | 67859 | 47245494 ~ 47255098 (+) |
| LOC110520054 | LOC106586173 | coding | downstream | 78529 | 47256164 ~ 47259319 (+) |
| LOC110520056 | LOC106586174 | coding | downstream | 137582 | 47315217 ~ 47441923 (+) |
| LOC110520057 | dal1b | coding | downstream | 264871 | 47442506 ~ 47445211 (+) |
| LOC110520058 | tanc1 | coding | downstream | 269742 | 47447377 ~ 47724843 (+) |
| G265150 | NA | non-coding | upstream | 788 | 47174873 ~ 47175160 (+) |
| G265148 | NA | non-coding | upstream | 3130 | 47172506 ~ 47172818 (+) |
| G265147 | NA | non-coding | upstream | 3448 | 47172285 ~ 47172500 (+) |
| G265141 | LOC106586171 | non-coding | upstream | 8958 | 47166697 ~ 47166990 (+) |
| G265142 | NA | non-coding | upstream | 13652 | 47162080 ~ 47162296 (+) |
| G265120 | NA | non-coding | downstream | 6936 | 47184571 ~ 47185621 (+) |
| G265577 | NA | non-coding | downstream | 302607 | 47480242 ~ 47480460 (+) |
| G265620 | NA | non-coding | downstream | 407714 | 47585349 ~ 47585634 (+) |
| G263859 | LOC107588258 | other | upstream | 991144 | 46184134 ~ 46184804 (+) |
| G263733 | LOC106586158 | other | upstream | 1096523 | 46075484 ~ 46079425 (+) |
| G263710 | NA | other | upstream | 1241530 | 45934119 ~ 45934418 (+) |
| G263547 | LOC106586150 | other | upstream | 1336468 | 45838921 ~ 45839480 (+) |
| G267358 | NA | other | downstream | 2333168 | 49510803 ~ 49512475 (+) |
| G267381 | NA | other | downstream | 2376863 | 49554498 ~ 49555838 (+) |
| G267529 | NA | other | downstream | 2658982 | 49836617 ~ 49855502 (+) |
| hoxd3a | hoxd3 | other | downstream | 2984666 | 50162278 ~ 50184327 (+) |
| LOC110520146 | ino80d | other | downstream | 3424667 | 50601983 ~ 50618761 (+) |
