Gene
RNA
| Item | Value |
|---|---|
| gene id | G265147 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 47172285 ~ 47172500 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU301375 | True | 216 | lncRNA | 0.39 | 1 | 47172285 | 47172500 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520048 | LOC106586169 | coding | upstream | 38983 | 47118728 ~ 47133302 (+) |
| LOC110504153 | gpd2 | coding | upstream | 144339 | 47020995 ~ 47027946 (+) |
| LOC110520046 | LOC106586167 | coding | upstream | 339997 | 46801058 ~ 46832288 (+) |
| LOC110520045 | LOC106586166 | coding | upstream | 394893 | 46724055 ~ 46777392 (+) |
| LOC110504152 | LOC106586162 | coding | upstream | 627990 | 46458590 ~ 46544295 (+) |
| LOC110520055 | cg057 | coding | downstream | 72994 | 47245494 ~ 47255098 (+) |
| LOC110520054 | LOC106586173 | coding | downstream | 83664 | 47256164 ~ 47259319 (+) |
| LOC110520056 | LOC106586174 | coding | downstream | 142717 | 47315217 ~ 47441923 (+) |
| LOC110520057 | dal1b | coding | downstream | 270006 | 47442506 ~ 47445211 (+) |
| LOC110520058 | tanc1 | coding | downstream | 274877 | 47447377 ~ 47724843 (+) |
| G265141 | LOC106586171 | non-coding | upstream | 5295 | 47166697 ~ 47166990 (+) |
| G265142 | NA | non-coding | upstream | 9989 | 47162080 ~ 47162296 (+) |
| G265140 | LOC106586171 | non-coding | upstream | 12509 | 47159542 ~ 47159776 (+) |
| G265137 | NA | non-coding | upstream | 25953 | 47145937 ~ 47146332 (+) |
| G265135 | NA | non-coding | upstream | 26834 | 47145148 ~ 47145451 (+) |
| G265148 | NA | non-coding | downstream | 6 | 47172506 ~ 47172818 (+) |
| G265150 | NA | non-coding | downstream | 2373 | 47174873 ~ 47175160 (+) |
| G265152 | NA | non-coding | downstream | 3448 | 47175948 ~ 47177635 (+) |
| G265120 | NA | non-coding | downstream | 12071 | 47184571 ~ 47185621 (+) |
| G263859 | LOC107588258 | other | upstream | 987481 | 46184134 ~ 46184804 (+) |
| G263733 | LOC106586158 | other | upstream | 1092860 | 46075484 ~ 46079425 (+) |
| G263710 | NA | other | upstream | 1237867 | 45934119 ~ 45934418 (+) |
| G263547 | LOC106586150 | other | upstream | 1332805 | 45838921 ~ 45839480 (+) |
| G267358 | NA | other | downstream | 2338303 | 49510803 ~ 49512475 (+) |
| G267381 | NA | other | downstream | 2381998 | 49554498 ~ 49555838 (+) |
| G267529 | NA | other | downstream | 2664117 | 49836617 ~ 49855502 (+) |
| hoxd3a | hoxd3 | other | downstream | 2989801 | 50162278 ~ 50184327 (+) |
| LOC110520146 | ino80d | other | downstream | 3429802 | 50601983 ~ 50618761 (+) |
