G265670


Basic Information

Item Value
gene id G265670
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 47749631 ~ 47751071 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU301954
CAGAGTTGAAAAAGATCCTTTATATTAGATCCGTGCCCCATACACTAGTGAAAAATTATGCTCCTACAAAAAAAAGTGACTTTTCCCCACAATATTCATAAATAAAATAACTTCAAGTACTCTGACTCAGGTACAAAGAAAATGCTGTACATGGCACCAGTAGACCATGCATGACACAGCCAGATTCAAACACAGTGGTTATTACAAACGCCCTGTGTCCTTGGGTCTGTGGCAAAGCAAATGGAGAGAACATCTTTTATGAAAGGTACTGTGCATCACAATGGATTCTGTACTGACGATAGGATGATAATGTCAGAATTCGAGGCCCACCAGAGTTGACATtttgtacacacagacacacacacacacaaccttttgAAGGAATGCTAAACCAAAAGATTGAAATAATTACCTCCACACACATTTGAGAGGGCAGGCATTACCCAGATTGAAGAGACCACAGTGTTTGCAGAGGATATACATCACAGGTAATATACATGTATTTATCACTTTAGACTGAAATGAAACACCACAATCAAAGGCATAAACAATATTGAATGTCTTGTAAcaatactgtatgtacacataTTACAAACAATACTTCATATTAACATGAATGAATAGTATATACAGATGTCATTGCTGCCTCACTGTCCGTGTGAAGTTAGCGAGCAATGTAAAGATACATTGAAATGCAGTGTTACAGTAATACCGTCAGGAATCTTGTGGTACCCCGGCGGCACAGAGCAGTGTAAACAATTAATTTTTTCTCTTGGCTTTAGTTTTATgtccaaaaaaataaaataaaaacattccgTGAGATTTTTGTTCAAGCAGTTTTGCTTTTTTCTTCCTCGTCTTAGAAAACGGAACCATTTTCACTCATAAATAATTGACTAAATTAAATACATTCACTTTAATAttaatattaaaaaataaaaaataaactaagtACAGTTAGTTGGAACGTTTTGTTCCCAGTTGCAGCTCCGATGTGGTTTCTTCTAGGAAATGGTATTGCACTTTAAAAACACCCACCCCTTTTGTGTGTATCCCTTTGGGTGCATTTCTCTGCTCTTAAAAAAAGAAACTGCATTCTACTGTACATCACTGAAGTGAATGTGTAGAATTACAATTGTAAATTCATTTAGGTTCCCTGGATGCTGACGGAGAGACTTTAGACCAATCCAGCTGCTCTGCTTGTGGTTACTGCTGGTCCCATACAGTATAGTGAGGATAAAGTAGTCCAAACTAGCCTAGTTGGTTTGTTTTAACAGCTCATTCCATCTACTCTCAAAAAAACTCCTCATGTTGTGTCCGGCTCGTCCAATGTCCGAATTGTCTTCATTAAACCTTTCACAGTTATCAAAAACCAAGTTAACGTCGATTATAAACGTCTCGAGGTTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU301954 True 1407 lncRNA 0.37 2 47749631 47751071

Neighbor

gene id symbol gene type direction distance location
LOC110520058 tanc1 coding upstream 24788 47447377 ~ 47724843 (+)
LOC110520057 dal1b coding upstream 304420 47442506 ~ 47445211 (+)
LOC110520056 LOC106586174 coding upstream 307708 47315217 ~ 47441923 (+)
LOC110520054 LOC106586173 coding upstream 490312 47256164 ~ 47259319 (+)
LOC110520055 cg057 coding upstream 494533 47245494 ~ 47255098 (+)
LOC118958036 NA coding downstream 95982 47847053 ~ 47851905 (+)
LOC110520065 LOC106586184 coding downstream 178250 47929321 ~ 47948028 (+)
LOC110520066 LOC106586185 coding downstream 220902 47971973 ~ 47976838 (+)
LOC110520067 LOC106586186 coding downstream 229981 47981052 ~ 48027085 (+)
LOC118958193 NA coding downstream 277167 48028238 ~ 48029697 (+)
G265682 NA non-coding upstream 21714 47727110 ~ 47727917 (+)
G265634 NA non-coding upstream 144978 47604340 ~ 47604653 (+)
G265621 NA non-coding upstream 163582 47585828 ~ 47586049 (+)
G265620 NA non-coding upstream 163997 47585349 ~ 47585634 (+)
G265577 NA non-coding upstream 269171 47480242 ~ 47480460 (+)
G265759 NA non-coding downstream 101090 47852161 ~ 47852393 (+)
G265761 NA non-coding downstream 103671 47854742 ~ 47854946 (+)
G265763 LOC106586182 non-coding downstream 106305 47857376 ~ 47861453 (+)
G265795 NA non-coding downstream 161822 47912893 ~ 47913100 (+)
G265805 NA non-coding downstream 171688 47922759 ~ 47923118 (+)
LOC110520046 LOC106586167 other upstream 917387 46801058 ~ 46832288 (+)
G263859 LOC107588258 other upstream 1564827 46184134 ~ 46184804 (+)
G263733 LOC106586158 other upstream 1670206 46075484 ~ 46079425 (+)
G263710 NA other upstream 1815213 45934119 ~ 45934418 (+)
G263547 LOC106586150 other upstream 1910151 45838921 ~ 45839480 (+)
G267358 NA other downstream 1759732 49510803 ~ 49512475 (+)
G267381 NA other downstream 1803427 49554498 ~ 49555838 (+)
G267529 NA other downstream 2085546 49836617 ~ 49855502 (+)
hoxd3a hoxd3 other downstream 2411230 50162278 ~ 50184327 (+)
LOC110520146 ino80d other downstream 2851231 50601983 ~ 50618761 (+)

Expression


Co-expression Network