G266300


Basic Information

Item Value
gene id G266300
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 48077755 ~ 48078999 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU302642
TGTAGttaccaaagaagtgttaaacaaatcaaaatatattttatatttcagattcttcaaacagccactctttgccttgatgacagctttgcacacttttggcattctctcagccagcttcacatggaatgcttttccaacagtcttgaaggagttcccacatatgctgtgcacttgttggctgcttttccttcaatctgcagtccgactcatcccaaaccatctcaatttggttgaggtcaggggattgtggaggccgggatgcatcactctccttcttggtaaaatagtccttacacagcctggaggtgtgttgggtcattgtcctgttgaaaaacaaatgatagtcccattaagtccaaaccagatgggatggcgtatcactgcagaattctgtggtagccatgctggttaactgtgccttgaattctaaataaatcccagtgtcaccagcaaaagcacccccacaccataacacctcctcctccatgctttaaggTGGGAAATACATATGGAGAGATCATCCCTTCTctcacaccgcgtctcacaaagacaccatggttggaaccaaaaatctcaaatttggactccagaccaaaggacaaatttccaccggtctaatgtccattgcttgtgtttcttgacacaagcaagtctcttcttattattggtgtcctttagtggtggtttctttgcagcaatttgaccatgaacgcctgattcacacagtctcctctgaacagttgatgttgacatgtgtctgtttcttgaactctgtgaagcatttatttgggctgcaatttctgaggctggtaactctaatgaacttatcctctgcagcatagctgactctgggtcttccatcctgtgacggtcctcatgagagccaggttcatcaaagcgcttgatggtttttgtgactgcacataaagaatctttcaaagttcttgaaatgttccgtactgactgaccttcacatcttaaagtaatgatggactgtcatttcgctttgcttatttcagctgttcttgccataatatggaccaaatagggctatcttctgtataccacccctaccttgtcacaccacaactgattggctcaaatgcattaagaaggaaagaaattccacaaataacttttaaggcacacctgttaattgaaatgcattccaggtgactaactcatgaatctggtcgagagaatgccaagagcgggCAAATATGTAATCAATGCAAAGGgcgg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU302642 True 1245 lncRNA 0.43 1 48077755 48078999

Neighbor

gene id symbol gene type direction distance location
LOC118958193 NA coding upstream 48058 48028238 ~ 48029697 (+)
LOC110520067 LOC106586186 coding upstream 50670 47981052 ~ 48027085 (+)
LOC110520066 LOC106586185 coding upstream 100917 47971973 ~ 47976838 (+)
LOC110520065 LOC106586184 coding upstream 129727 47929321 ~ 47948028 (+)
LOC118958036 NA coding upstream 225850 47847053 ~ 47851905 (+)
LOC110520075 LOC106586196 coding downstream 376211 48455210 ~ 48508839 (+)
LOC110504158 LOC106903880 coding downstream 464021 48542999 ~ 48563667 (+)
LOC110520076 LOC106586200 coding downstream 483652 48562651 ~ 48577839 (+)
LOC110520080 LOC106581709 coding downstream 566111 48645110 ~ 48667115 (+)
LOC110520081 LOC106581793 coding downstream 593041 48672040 ~ 48795272 (+)
G266299 NA non-coding upstream 64 48077246 ~ 48077691 (+)
G265851 NA non-coding upstream 44778 48032039 ~ 48032977 (+)
G265811 NA non-coding upstream 149339 47928210 ~ 47928416 (+)
G265810 NA non-coding upstream 149565 47927887 ~ 47928190 (+)
G265809 NA non-coding upstream 150502 47927018 ~ 47927253 (+)
G266478 NA non-coding downstream 124960 48203959 ~ 48204325 (+)
G266524 NA non-coding downstream 154970 48233969 ~ 48234915 (+)
G266525 NA non-coding downstream 162193 48241192 ~ 48241427 (+)
G266580 NA non-coding downstream 197104 48276103 ~ 48276319 (+)
G266584 NA non-coding downstream 200064 48279063 ~ 48279285 (+)
LOC110520046 LOC106586167 other upstream 1245511 46801058 ~ 46832288 (+)
G263859 LOC107588258 other upstream 1892951 46184134 ~ 46184804 (+)
G263733 LOC106586158 other upstream 1998330 46075484 ~ 46079425 (+)
G263710 NA other upstream 2143337 45934119 ~ 45934418 (+)
G263547 LOC106586150 other upstream 2238275 45838921 ~ 45839480 (+)
G267358 NA other downstream 1431804 49510803 ~ 49512475 (+)
G267381 NA other downstream 1475499 49554498 ~ 49555838 (+)
G267529 NA other downstream 1757618 49836617 ~ 49855502 (+)
hoxd3a hoxd3 other downstream 2083302 50162278 ~ 50184327 (+)
LOC110520146 ino80d other downstream 2523303 50601983 ~ 50618761 (+)

Expression


Co-expression Network