XLOC_022467 (zgc:153284)


Basic Information

Item Value
gene id XLOC_022467
gene name zgc:153284
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 31426493 ~ 31436524 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044310
TTTTGGACACACGTGGAGAGCAGCTTGTGGAACTGCCTTACGACAGCTTGCTCACCTTGATGAGGTTGATCTGATGCTCGGCACAGAGAGCCTCCACCAGCTTGACGTACATGGGCTCGTCACAGTTTGCAGCGAGGACGCAAAGATGAGCCTGGCGCCTGCAAGACAGACAAACCATTATCAGCCTTCAAACCTCCTCAATCAGGTAAAGCAACATCAGGGTGAGATTTTGGGGTTTTTGGATTCCAAAAAGATCAAATACTTTACCGTAGACATCTCCACAAGCAATGACGCAAAGGAGCAGATGAGGAAGAAAGTAGGAAACCCCTCAGCAATGCCTCCTCAGGTGTTTAATGGAGACAAGTACTGTGGGGACTATCAGAAGTTTTTTGATGCAGTGGAGGAGGGGAAACCAGAAGCTTTCTTCAAACTCTGAGCTGCTATTTGCACACTACACTACTGTACACTGAACCCTTCTGTTTGTAAAAGAGAGAATATTTTATGTTTGGAAAATGCATATTTTGcaccattaaataaataaaaggttttctatcata
>TCONS_00044311
GTCAAAACTTGCTTTCCTGGTCCTTGAGTTGGCTGGGTTTATTGTTTTACACAGCTTACCGAAACACATTTGAGCTTTTAGCACTTTTAGAAGATGTCTATCACGGTGTATTACAGCAGCGTCAGTGGCTCTAGAGAGGTAAAGCAACATCAGGGTGAGATTTTGGGGTTTTTGGATTCCAAAAAGATCAAATACTTTACCGTAGACATCTCCACAAGCAATGACGCAAAGGAGCAGATGAGGAAGAAAGTAGGAAACCCCTCAGCAATGCCTCCTCAGGTGTTTAATGGAGACAAGTACTGTGGGGACTATCAGAAGTTTTTTGATGCAGTGGAGGAGGGGAAACCAGAAGCTTTCTTCAAACTCTGAGCTGCTATTTGCACACTACACTACTGTACACTGAACCCTTCTGTTTGTAAAAGAGAGAATATTTTATGTTTGGAAAATGCATATTTTGcaccattaaataaataaaaggttttctatca
>TCONS_00044312
TTTGAGCTTTTAGCACTTTTAGAAGATGTCTATCACGGTGTATTACAGCAGCGTCAGTGGCTCTAGAGAGGTAAAGCAACATCAGGGTGAGATTTTGGGGTTTTTGGATTCCAAAAAGATCAAATACTTTACCGTAGACATCTCCACAAGCAATGACGCAAAGGAGCAGATGAGGAAGAAAGTAGGAAACCCCTCAGCAATGCCTCCTCAGGTGTTTAATGGAGACAAGTACTGTGGGGTGAGTGAGTCTTGGCCTGCTGTCTCTtttgctaacactttattttaaagtgtcgTTGTAActacttattaattaattacatgtatACTTACTATATTGGTCCGAGAGGTTTAAGGTTAATAGGATGTTGTTATGTgttattattgtaaattttaaTTACTATAGTTAGTAAATAGAACATGTATCAATGAAACATTTATACATCTTCGATTCTGTAgaaggaatgtttttttttctccagtgttTAAAGTTATATTACAAAGATTTTCAATCCATAAAAAAGGACACACTAGTCCcttaaaattaacaaatatttacaaattatttactgtcagtaACATAAATGACCATACAGGTAAttgttatttatcattatttgttaCAGATTGCAGGTTGTATATAAGATCTTAACTGATATAAACTGCTATTTATAATGATAGTTGATTTGATGATGACCGCTGTTTATATTTGGGTTTaatatcattaattaaaaaattttaaggtAGTATTCAT

Function

symbol description
zgc:153284 Predicted to enable protein-disulfide reductase activity.

GO:

id name namespace
GO:0045454 cell redox homeostasis biological_process
GO:0009055 electron transfer activity molecular_function
GO:0015035 protein disulfide oxidoreductase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060825-317 Predicted to enable protein-disulfide reductase activity.

Ensembl:

ensembl_id ENSDARG00000036876

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044310 False 557 mRNA 0.44 4 31426493 31436524
TCONS_00044311 False 488 mRNA 0.40 3 31426495 31428763
TCONS_00044312 True 751 lncRNA 0.32 2 31427675 31428695

Neighbor

gene id symbol gene type direction distance location
XLOC_022466 NA coding downstream 2971 31420811 ~ 31423522 (-)
XLOC_022465 CR759830.3 coding downstream 22785 31401819 ~ 31403708 (-)
XLOC_022464 lca5 coding downstream 25701 31380607 ~ 31400792 (-)
XLOC_022463 hmgn3 coding downstream 53686 31358088 ~ 31372807 (-)
XLOC_022462 phip coding downstream 80106 31276162 ~ 31346387 (-)
XLOC_022468 eya4 coding upstream 3189 31439713 ~ 31512497 (-)
XLOC_022469 tcf21 coding upstream 117745 31554269 ~ 31555696 (-)
XLOC_022470 slc2a12 coding upstream 171735 31608259 ~ 31633310 (-)
XLOC_022471 sgk1 coding upstream 203715 31640239 ~ 31693309 (-)
XLOC_022472 BX927365.1 coding upstream 256844 31693368 ~ 31717710 (-)
XLOC_022461 NA non-coding downstream 159872 31253300 ~ 31266621 (-)
XLOC_022458 NA non-coding downstream 505482 30906424 ~ 30921011 (-)
XLOC_022453 CR456642.2 non-coding downstream 727806 30517199 ~ 30698687 (-)
XLOC_022454 CR456642.1 non-coding downstream 818392 30607983 ~ 30608101 (-)
XLOC_022474 BX927365.2 non-coding upstream 318228 31754752 ~ 31754868 (-)
XLOC_022480 NA non-coding upstream 570381 32006905 ~ 32007796 (-)
XLOC_022482 NA non-coding upstream 674794 32111318 ~ 32141320 (-)
XLOC_022484 CU469363.1 non-coding upstream 703319 32139843 ~ 32139958 (-)

Expression


Co-expression Network