XLOC_022480



Basic Information


Item Value
gene id XLOC_022480
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 32006905 ~ 32007796 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00045035
CTGCCACATTATGAAAAAGTACAACATATTTTACAAAATAGAAAACAAGCCAGTAAATCCACAGACTGCGTGATCCAtattcattttcagaatgagagCAATTTCCAACACAACATTAACAAGCAAGCATGAAACACTTGAACGAGCTCTTACAGGTGTTGAAATCATGATTTGTTTGTGTACTTTCTTCCTGACAGACCAGATATAGACTAGGAACTGGCATGGTGAATTGTTCATTGTTCAGTTTTCAAATGGCAGACTTTTTTCTAGGACAGAAAACATGCCTTATTTCAGATGTGCAACATGAAATATATGTATCAGGTGGCAATTTGGATGAAACAGTGTTGGAAGAGAACACCGAAAGTCTATACAAGAAGTGCTGGAGAGCTGGCATCTGTTTGGCAGGAATATATCCAACAGATCCAATCATAAACCCATCACTGAGGGAAATACGGCTGTGCTTAT

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00045035 True 465 lncRNA 0.38 2 32006905 32007796

Neighbor


gene id symbol gene type direction distance location
XLOC_022479 BX927210.1 coding downstream 32845 31972384 ~ 31974060 (-)
XLOC_022478 ormdl2 coding downstream 37119 31962383 ~ 31969786 (-)
XLOC_022477 si:dkey-126g1.7 coding downstream 74829 31920840 ~ 31932076 (-)
XLOC_022476 mtfr2 coding downstream 93616 31901350 ~ 31913289 (-)
XLOC_022475 hbs1l coding downstream 196514 31764061 ~ 31810391 (-)
XLOC_022481 letmd1 coding upstream 71250 32079046 ~ 32100106 (-)
XLOC_022482 NA coding upstream 103522 32111318 ~ 32141320 (-)
XLOC_022483 rprm3 coding upstream 120603 32128399 ~ 32129614 (-)
XLOC_022484 CU469363.1 coding upstream 132047 32139843 ~ 32139958 (-)
XLOC_022485 nr4a1 coding upstream 141473 32149269 ~ 32194397 (-)
XLOC_022474 BX927365.2 non-coding downstream 252037 31754752 ~ 31754868 (-)
XLOC_022472 BX927365.1 non-coding downstream 289195 31693368 ~ 31717710 (-)
XLOC_022466 NA non-coding downstream 583383 31420811 ~ 31423522 (-)
XLOC_022461 NA non-coding downstream 740284 31253300 ~ 31266621 (-)
XLOC_022458 NA non-coding downstream 1085894 30906424 ~ 30921011 (-)
XLOC_022489 NA non-coding upstream 340203 32347999 ~ 32352704 (-)
XLOC_022492 NA non-coding upstream 400982 32408778 ~ 32570699 (-)
XLOC_022493 NA non-coding upstream 451059 32458855 ~ 32461920 (-)

Expression



Co-expression Network