XLOC_002256 (zgc:174193)


Basic Information

Item Value
gene id XLOC_002256
gene name zgc:174193
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 34047352 ~ 34104491 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004314
aacaaagcaactgttgtatttatgaataggTCAAGGATGAATCGACtctcacaatttatttaaatccacAGATTCATTCGCAAAAAATAACCCACTCTAGCCTAACATATAAGGACTGAACCGATGTGAACGCTAACAGaatcctttACCAACGTTGCGTCTTGGCAAGTCATCTGATGTGCGTCAAGGTGAATTTGTGGTTGCCATGGGGAGTCCCTTTTCTCTTAAAAACACCATCACATCTGGAATCGTCAGCTCTGCTCAGAGAGGCAGTAAAGAACTGGGTCTCTCCAACTCCAACATGGACTACATCCAGACGGACGCTACCATAGATGATGGTGAGGTCATCGGCATTAATACCATGAAAGTGACAGCAGGGATTTCCTTCGCTATTCCCTCAGACAGAGTCAGTCTCTTCCTAGACCGATCTGCAGACAAACAGAAGTCTTGGTTTGGAGAATCGGGATCGAAAAGGCGTTACATTGAAGTGATGATGTTGACTTTGACCCCCAGTATAATCGATGAGCTAAGGATGCGAGACCCGTCCTTCCCTGATGTTTCTCATGGAGTTCTCATCCACCGGGTGATTGTAGGATCTCCAGCCAACAGaGCCGGAATGAAGCCAGGAGAAGTTATTATTGAGATCAATGGGGTAAAGGTGAACACGTCGGAGGAGATATATAATGCTGTGAGGACCAGCGAAAGCTTAAATGTGGTGGTCCGCCGTGGGGCCGACCTGCTCATGCTGCACATGACCCCAGAGTCCACAGAGCGACATCAAGTCAAGTATTTAGTAAGATTAAGAAATGGTGAGTAATGAGAAGCTGTCATAGTTGGAGATGTTGTAAGAAAGGAATCATCTAAAGAGTTGAACAGTTTTAGCAAACGCTGGACATTCGTGTAGTAAACGTGTTTCTGGAAGCGTATGAAATAATGTGGATGATTCAGACTTCTGTACACTGgataaacctcagtgtgtctgcGCAAACTACACTATCAGTATTGATTTGAAGGAATATCACTGAATATTTTGTTTAGGATTGTCATGATGGCAACAAACACTCAACGACCTTAATAAAACTGGGTGCTCTTATTGTGAAAAtgctgatgttttgtattgagtctcacattctcatgttacgacgtttgtattttaatacatttttctgaacAGCTCTGATTTCACAATAAACCATTGGAATATTTATGG
>TCONS_00004315
aactgttgtatttatgaataggTCAAGGATGAATCGACtctcacaatttatttaaatccacAGATTCATTCGCAAAAAATAACCCACTCTAGCCTAACATATAAGGACTGAACCGATGTGAACGCTAACAGAATCTTCTACCAACGTTGCGTCTTGGCAAGTCATCTGATGTGCGTCAAGGTGAATTTGTGGTTGCCATGGGGAGCCCCTTTTCTCTTAAAAACACCATCACATCTGGAATCGTCAGCTCTGCTCAGAGAGACAGTAAAGAACTGGGTCTCTCCTACTCCAACATGGACTACATCCAGACGGACGCTACCATAGATTTTGGAAATTCAGGAGGGCCTCTCATAAACCTGGATGGTGAGGTCATCGGCATTAATACCATGAAAGTGACAGCAGGGATTTCCTTCGCTATTCCCTCAGACAGACTCCGTCTCTTCCTAGACCGATCTGTAGATAGAAGTCTTGGTTTGGAGAATCGGGATCGAAAAGGCGTTACATTGGAGTGATGATGTTGACTTTGACCCCCAGTATAATCGAAGAGCTAAGGATGCGAGACCCGTCCTTCCCTGATGTTTCTCATGGAGTTTTCATCCACCGTGTGATTGTAGGATCTCCAGCCAACAGaGCTGGAATGAAGCCAGGAGATGTTATTATTGAGATCAATGGGGTAAAGGTGAACACGTCGTAGGAGATATATAATGCTGTGAGGACCAGCGAAAGCTTAAATGTGGTGGTCCGCCAGGTCCGACATCAAGTCAAGTATTTAGTAAGATTAAGAAATGGTGAGTAATGAGAAGCTGTCATAGTTGGAGATGTTGTAAGAAAGGAATCATCTAAAGAGTTGAACAGTTGTAGCAAACGCTGGACATTCGTGTAGTAAACGTGTTTCTGGAAGCGTATGAAATAATGTGGATGATTCAGACTTCTGTACACTGgataaacctcagtgtgtctgcGCAAACTACACTATCAGTATTGATTTGAAGGAATATCACTGAATATTTTGTTTAGGATTGTCATGATGGCAACAAACACTCAAAGACCTTAATAAAACTGGGTGCTCTTATTGTGAAAAtgctgatgttttgtattgagtctcacattctcatgttacgatgtttgtattttaatacatttttctgaacAGCTCTGATTTCACAATAAACCATTGGAATATTTATGGATGATTTG
>TCONS_00005916
TTTCAGAGTCTTGGTTTGGAGAATCGGGATCGAAAAGGCGTTACATTGGAGTGATGATGTTGACTTTGACCCCCAGGTGCCAAacacttttattacaattttacaggaGAGCAAAATTCATACATTATGGAATCTACAGATTTTTGTTATTTACCACTAGATTTGGCTCTTAGAAATTCAAGTGCTGGAATACCTGGAAAATTGGCTTGTTTTGTTGAAAAGTGCTTAATTTATCAAGGAGAATTTGTATGCAATTTTCACGcccgaaaaataaaaatgtttgtgaatttttgttacaatttaatgcaaaaatacccgcACAATTTACCGTGATTGCGAAGCAGTGATTTAAATGATATgagaagtggccaatcacagtcaacctTGTTTAGTTTTACCTGAaatgtaagggcgggacaaaggcctttctgtgttgcagtgacagaaaaaaacaactgaaaaacaaatgtattatggGAATAatgcttttcagatgtttttactatgttattagcaagagtaattaaaccgcagACATTGAAGTGTTTTTGGTTGAAGCAAATGTAATATTGATTGTTTTGCTGATCTGTCTATTAAactatcaattaatcaatcaatttatctatgaatctatctatcttatctatTTATCAATCAATCCTTAAACCGTAAACTTTGCACTGAAGTgagtcttttattatctttaaattctTTTTCCCCTCCTCAGTATAATCGAAGAGCTAAGGATGCGAGACCCGTCCTTCCCTGATGTTTCTCATGGAGTTTTCATCCACCGTGTGATTGTAGGATCTCCAGCCAACAGGTGTGCTGCTCTCTGAACATGATGTTATCAGCTGTTGATTAAGGCATCCTATTgatgatgtcatttcctgttttctgttttgcagaGCTGGAATGAAGCCAGGAGATGTTATTATTGAGATCAATGGGGTAAAGGTGAACACGTCGTAGGAGATATATAATGCTGTGAGGACCAGCGAAAGCTTAAATGTGGTGGTCCGCCAGG
>TCONS_00004316
aaagcaactgttgtatttatgaatGGATGAATCGACTCTCACAATTCATTTAAATCCACAGATTCATTCTCAAAAAATAACCCACTCTAGCCTAAATAAGGACTCAACCGATGTAAATGCTAACAGACACCCCTTTTCTGGCCGCGAGGTTCCCATCTCGAATGGTTCTGGCTTTATAATAAGTAGTGATGGCCTGATAGTGACAAATGCCCATGTGGTCGCCAACAAGCGTGGTGTTTGTGTCAAACTGACCAATGGTGAGACTTACAACGCCACAGTTCAGGATGTGGACCAGGCTGCAGACATCGCCACCATCAAAATCAATGTTAAGaatcctttACCAACGTTGCGTCTTGGCAAGTCATCTGATGTGCGTCAAGGTGAATTTGTGGTTGCCATGGGGAGTCCCTTTTCTCTTAAAAACACCATCACATCTGGAATCGTCAGCTCTGCTCAGAGAGGCAGTAAAGAACTGGGTCTCTCCAACTCCAACATGGACTACATCCAGACGGACGCTACCATAGATTTTGGAAATTCAGGAGGGCCTCTCATACACATGGATGGTGAGGTCATCTGCATTAATACCATGAAAGTGACAGCAGGGATTTCCTTCGCTATTCCCTCTGACAGAGTCCGTCTCTTCCTAGACCGATCTGCAGACAAATAGAACTCTTGGTTTGGAGAATCGGGATCGAAAAGGCGTTACATTGGAGTGATGATGTTGACTTTGACCCCCAGTATAATCGAAGAGCTAAGGATGCGAGACCCGTCCTTCCCTGATGTTTCTCATGGAGTTTTCATCCACCTTGTGATTGTAGGATCTCCAGCCAACAGaGCTGGAATGAAGCCAGGAGAAGTTATTATTGAGATCAATGGGGTAAAGGTGAACACGTCGGAGGAGATATATAATGCTGTGAGGACCAGCGAAAGCTTAAATGTGGTGGTCCGCCGGGGGGGCGACCTGCTCATGCTGCACATGACCCCAGAGTCCACAGAGTGACATCAAGTCAAGTATTTAGTAAGATTAAGAAATGGTGAGTAATGAGAAGCTGTCATAGTTGGAGATGTTGTAAGAAAGGAATCATCTAAAGAGTTGAACAGTTTTAGCAAACGCTGGACATTCGTGTAGTAAACGTGTTTCTGGAAGCGTATGAAATAATGTGGATGATTCAGACTTCTGTACACTGgataaacctcagtgtgtctgcGCAAACTACACTATCAGTATTGATTTGAAGGAATATCACTGAATATTTTGTTTAGGATTGTCATGAGGGCAACAAACACTCAAAGACCTTAATAAAACTGGGTGCTCTTATTGTGAAAAtgctgatgttttgtattgagtctcacattctcatgttacgacgtttgtattttaatacatttttctgaacAGCTCTGATTTCACAATAAACCATTGGAATATTTATGGATGATTTG
>TCONS_00004317
attcagcaacaaagcaactgttgtatttatgaataggTCAAGGATGAATCGACtctcacaatttatttaaatccacAGATTCGTTCGCAAAAAATAACCCACTCTAGCCTAAATAAGGACTGAACCGATGTGAACGCTAACAGAATCCTCTACCACGTTGCGTCTTGGCAAGTCATCTGATGTGTGTCAAGGTGAATTTGTGGTTGCCATGGGGAGCCCCTTTTCTCTTAAAAACACCATCACATCTGGAATCGTCAGCTCTGCTCAGAGAGACAGTAAAGAACTGGGTCTCTCCAACTCCAACAAGGACTACATCCAGACGGACGCTACCATAGATTTTGGAAATTCAGGAGGGCCTCTCATAAACCTGGATGGTGAGGTCATCGGCATTAATACCATGAAAGTGACAGCAGGGATTTCCTTCGCTATTCCCTCAGACAGAGTCAGTCTCTTCCTAGACCGATCTGCAGACAAACAGAAGTCTTGGTTTGGAGAATCGGGATCGAAAAGGCGTTACATTGAAGTGATGATGTTGACTTTGACCCCCAGTATAATCGATGAGCTAAGGATGCGAGACCCGTCCTTCCCTGATGTTTCTCATGGAGTTCTCATCCACCGGGTGATTGTAGGATCTCCAGCCAACAGaGCCGGAATGAAGCCAGGAGAAGTTATTATTGAGATCAATGGGGTAAAGGTGAACACGTCGGAGGAGATATATAATGCTGTGAGGACCAGCGAAAGCTTAAATGTGGTGGTCCGCCGTGGGGCCGACCTGCTCATGCTGCACATGACCCCAGAGTCCACAGAGCGACATCAAGTCAAGTATTTAGTAAGATTAAGAAATGGTGAGTAATGAGAAGCTGTCATAGTTGGAGATGTTGTAAGAAAGGAATCATCTAAAGAGTTGAACAGTTTTAGCAAACGCTGGACATTCGTGTAGTAAACGTGTTTCTGGAAGCGTATGAAATAATGTGGATGATTCAGACTTCTGTACACTGgataaacctcagtgtgtctgcGCAAACTACACTATCAGTATTGATTTGAAGGAATATCACTGAATATTTTGTTTAGGATTGTCATGATGGCAACAAACACTCAACGACCTTAATAAAACTGGGTGCTCTTATTGTGAAAAtgctgatgttttgtattgagtctcacattctcatgttacgacgtttgtattttaatacatttttctgaacAGCTCTGATTTCACAATAAACCATTGGAATATTTATGGATGATTTG

Function

symbol description
zgc:174193 Predicted to enable serine-type endopeptidase activity. Predicted to act upstream of or within proteolysis.

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0005575 cellular_component cellular_component
GO:0004252 serine-type endopeptidase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-080215-8 Predicted to enable serine-type endopeptidase activity. Predicted to act upstream of or within proteolysis.

Ensembl:

ensembl_id ENSDARG00000092625 ENSDARG00000094713 ENSDARG00000098865

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004314 False 1210 mRNA 0.42 6 34047352 34104483
TCONS_00004315 False 1197 unprocessed_pseudogene 0.41 7 34047360 34058765
TCONS_00005916 False 1027 lncRNA 0.37 1 34057291 34058317
TCONS_00004316 False 1443 processed_pseudogene 0.43 8 34067879 34086349
TCONS_00004317 True 1254 mRNA 0.43 7 34091763 34104491

Neighbor

gene id symbol gene type direction distance location
XLOC_002255 BX548044.4 coding upstream 4033 34035689 ~ 34043319 (+)
XLOC_002254 kl coding upstream 21227 34001444 ~ 34026125 (+)
XLOC_002253 fryb coding upstream 47571 33895315 ~ 33999781 (+)
XLOC_002252 NA coding upstream 176340 33870189 ~ 33871012 (+)
XLOC_002251 rxfp2a coding upstream 179926 33744098 ~ 33867426 (+)
XLOC_002257 BX548044.5 coding downstream 4050 34108541 ~ 34120301 (+)
XLOC_002258 BX548044.1 coding downstream 19930 34124421 ~ 34147245 (+)
XLOC_002259 BX548044.2 coding downstream 46795 34151286 ~ 34171425 (+)
XLOC_002260 BX548044.3 coding downstream 70977 34175468 ~ 34220241 (+)
XLOC_002261 NA coding downstream 86051 34190542 ~ 34193306 (+)
XLOC_002245 NA non-coding upstream 679187 33360328 ~ 33368165 (+)
XLOC_002244 NA non-coding upstream 688326 33357096 ~ 33359026 (+)
XLOC_002243 NA non-coding upstream 781665 33265381 ~ 33265687 (+)

Expression


Co-expression Network