XLOC_002257 (BX548044.5)


Basic Information

Item Value
gene id XLOC_002257
gene name BX548044.5
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 34108541 ~ 34120301 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004318
aaagcaactgttgtatttatgaataggTCAAGGATGAATCGACTCTCACAATTCATTTAAATCCACAGATTCATTCTCAAAAAATAACCCACTCTAGCCTAAATAAGGACTGAACCGATGTGAACAGACACCCCTTTTCTGGCCGTGAGGTTCCCATCTCGAATGGTTCTGGCTTTATAATAAGTAGTGATGACCTCATAGTGACAAATGGCCATGTGGTCGCCAACAAGCGTGGTGTTCGTGTCAAACTGACCAATGGTGAGACATACAACGCCACAGTTCAGGATGTGGACCAGGCTGCAGACATCGCCACCATCAAAATCAATGTTAAGaatcctttACCAACGTTGCGTCTTGGCAAGTCATCTGATGTGCGTCAAGGTGAATTTGTGGTTGCCATGGGGAGCCCCTTTTCTCTTAAAAACACCATCACATCTGGAATCGTCAGCTCTGCTCAAAGAGGCAGTAAAGAACTGGGTCTCTCCAACTCCAACATGGACTACATCCAGACGGACGCTACCATAGATTTTGGAAATTCAGGAGGGCCTCTCATAAACCTGGATGGTGAGGTCATCGGCATTAATACCATGAAAGTGACAGCAGGGATTTCCTTCGCTATTCCCTCAGACAGAGTCCGTCTCTTCCTAGACCGATCTGTAGATAGAACTCTTGGTTTGGAGAATCGGGATCGAAAAGGCGTTACATTGGAGTGATGATGTTGACTTTGACCCCCAGTATAATCGAAGAGCTAAGGATGCGAGACCCGTCCTTCCCTGAGTTCTCATCCACCGTGTGATTGTAGGATCTCCAGCCAACAGaGCCGGAATGAAGCCAGGAGATGTTATTATTGAGATCAATGGGGTAAAGGTGAACACGCCGGAGGAGATATATAATGCTGTGAGGACCAGCGAAAGCTTAAATGTGTTGGTCCGCCGGGGGGCCGACCTGCTCATGCTGCACATGACCCCAGAGTCCACAGAGCGACATCAAGTCAAGTATTTAGTAAGATTAAGAAATGGTGAGTAATGAGAAGCTGTCATAGTTGGAGATGTTGTAAGAAAGGAATCATCTAAAGAGTTGAACAGTTTTAGCAAACGCTGGACATTCGTGTAGTAAACGTGTTTCTGGAAGCGTATGAAATAATGTGGATGATTCAGACTTCTGTACACTGgataaacctcagtgtgtctgTGCAAACTACACTATCAGTATTGATTTGAAGGAATATCACTGAATATTTTGTTTAGGATTGTCATGAGGGCAACAAACACTCAACGACCTTAATAAAACTGGGTGCTCTTATTGTGAAAAtgctgatgttttgtattgagtctcacattctcatgttacgacgtttgtattttaatacatttttctgaacAGCTCTGATTTCACAATAAACCATTGGAATATTTATGGA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000093522

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004318 True 1420 unprocessed_pseudogene 0.43 8 34108541 34120301

Neighbor

gene id symbol gene type direction distance location
XLOC_002256 zgc:174193 coding upstream 4050 34047352 ~ 34104491 (+)
XLOC_002255 BX548044.4 coding upstream 65222 34035689 ~ 34043319 (+)
XLOC_002254 kl coding upstream 82416 34001444 ~ 34026125 (+)
XLOC_002253 fryb coding upstream 108760 33895315 ~ 33999781 (+)
XLOC_002252 NA coding upstream 237529 33870189 ~ 33871012 (+)
XLOC_002258 BX548044.1 coding downstream 4120 34124421 ~ 34147245 (+)
XLOC_002259 BX548044.2 coding downstream 30985 34151286 ~ 34171425 (+)
XLOC_002260 BX548044.3 coding downstream 55167 34175468 ~ 34220241 (+)
XLOC_002261 NA coding downstream 70241 34190542 ~ 34193306 (+)
XLOC_002262 BX510654.2 coding downstream 115867 34236168 ~ 34236424 (+)
XLOC_002245 NA non-coding upstream 740376 33360328 ~ 33368165 (+)
XLOC_002244 NA non-coding upstream 749515 33357096 ~ 33359026 (+)
XLOC_002243 NA non-coding upstream 842854 33265381 ~ 33265687 (+)
XLOC_002263 NA non-coding downstream 118759 34239060 ~ 34239838 (+)

Expression


Co-expression Network