XLOC_002252


Basic Information

Item Value
gene id XLOC_002252
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 33870189 ~ 33871012 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005725
GTCTTTTTCTGTCAGCCGATGCGAGGAGACGCGAGACCAAATGAAGTGAAAATAACAGAATTCAGCGACGACGCCTGGATGAAGACATGAATATATAAActcctgaacacaaacacacaagGAAACTGGACCGTTTTTTATTCTGCATGGCAACAATCGCATCCTCCTTTGTCTAAACGGGGTGAGTCGTGAcagatttttttgtcattatttaattaCTCTGTTCATGTCGCTGTTTGTGTTCTGGATGTTATATAAGTACCGAGCAATACCGATGAAC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005725 True 280 lncRNA 0.41 2 33870189 33871012

Neighbor

gene id symbol gene type direction distance location
XLOC_002251 rxfp2a coding upstream 2763 33744098 ~ 33867426 (+)
XLOC_002250 b3glctb coding upstream 159962 33626344 ~ 33710227 (+)
XLOC_002249 mis18a coding upstream 276079 33588715 ~ 33594110 (+)
XLOC_002248 cfap298 coding upstream 291027 33573838 ~ 33579162 (+)
XLOC_002247 ryr1a coding upstream 329853 33406819 ~ 33540336 (+)
XLOC_002253 fryb coding downstream 24303 33895315 ~ 33999781 (+)
XLOC_002254 kl coding downstream 130432 34001444 ~ 34026125 (+)
XLOC_002255 BX548044.4 coding downstream 164677 34035689 ~ 34043319 (+)
XLOC_002256 zgc:174193 coding downstream 176340 34047352 ~ 34104491 (+)
XLOC_002257 BX548044.5 coding downstream 237529 34108541 ~ 34120301 (+)
XLOC_002245 NA non-coding upstream 502024 33360328 ~ 33368165 (+)
XLOC_002244 NA non-coding upstream 511163 33357096 ~ 33359026 (+)
XLOC_002243 NA non-coding upstream 604502 33265381 ~ 33265687 (+)
XLOC_002241 CU929186.1 non-coding upstream 867756 33002319 ~ 33002433 (+)
XLOC_002237 NA non-coding upstream 1278118 32584417 ~ 32592071 (+)
XLOC_002258 BX548044.1 non-coding downstream 253409 34124421 ~ 34147245 (+)
XLOC_002259 BX548044.2 non-coding downstream 280274 34151286 ~ 34171425 (+)
XLOC_002260 BX548044.3 non-coding downstream 304456 34175468 ~ 34220241 (+)

Expression


Co-expression Network