XLOC_002263


Basic Information

Item Value
gene id XLOC_002263
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 34239060 ~ 34239838 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005918
CGAAGAGCTAAGGATGCGAGACCCGTCCTTCCCTGATGTTTCTCATGGAGTTCTCATCCACCGTGTGATTGTAGGATCTCCAGCCAACAGGTGTGCTGCTCTCTGAACATGATGTTATCAGCTGTTGATTAAGGCATCCTTTgatgatgtcatttcctgttttctgttttgcagaGCCGGAATGAAGCCAGGAGATGTTATTATTGAGATCAATGGGGTAAAGGTGAACACGTCGTAGGAGATATATAATGCTGTGAGGACCAGCGAAAGCTTAAATGTGGTGGTCCGCCGGGGGGCCGACCTGCTCATGCTGCACATGACCCCAGAGTCCACAGAGTGACATCAAGTCAAGTATTTAGTAAGATTAAGAAATGGTGAGTAATGAGAAGCTGTCATAGTTGGAGATGTTGTAAGAAAGGAATCATCTAAAGAGTTGAACAGTTGTAGCAAACGCTGGACATTCGTGTAGTAAACGTGTTTCTGGAAGCGTATGAAATAATGTGGATGATTCAGACTTCTGTACACTGgataaacctcagtgtgtctgcGCAAACTACACTATCAGTATTGATTTGAAGGAATATCACTGAATATTTTGTTTAGGATTGTCATGAGGGCAACAAACACTCAAAGACCTTAATAAAACTGGGTGCTCTTATTGTGAAAAtgctgatgttttgtattgagtctcacattctcatgttacgatgtttgtattttaatacatttttctgaacAGCTCTGATTTCACAATAAACCATTGGAATATTTATGGATGA

Function

GO:

id name namespace
GO:0044260 cellular macromolecule metabolic process biological_process
GO:0043226 organelle cellular_component
GO:0043227 membrane-bounded organelle cellular_component
GO:0043229 intracellular organelle cellular_component

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005918 True 779 lncRNA 0.41 1 34239060 34239838

Neighbor

gene id symbol gene type direction distance location
XLOC_002262 BX510654.2 coding upstream 2636 34236168 ~ 34236424 (+)
XLOC_002260 BX548044.3 coding upstream 18819 34175468 ~ 34220241 (+)
XLOC_002261 NA coding upstream 45754 34190542 ~ 34193306 (+)
XLOC_002259 BX548044.2 coding upstream 67635 34151286 ~ 34171425 (+)
XLOC_002258 BX548044.1 coding upstream 91815 34124421 ~ 34147245 (+)
XLOC_002264 stard13a coding downstream 75881 34315719 ~ 34404768 (+)
XLOC_002265 nbeaa coding downstream 186418 34426256 ~ 34734995 (+)
XLOC_002266 CT573139.1 coding downstream 697710 34937548 ~ 34951865 (+)
XLOC_002267 rfxap coding downstream 718745 34958583 ~ 34961758 (+)
XLOC_002268 exosc8 coding downstream 762948 35002786 ~ 35011502 (+)
XLOC_002257 BX548044.5 non-coding upstream 118759 34108541 ~ 34120301 (+)
XLOC_002269 NA non-coding downstream 814473 35054311 ~ 35058561 (+)
XLOC_002271 NA non-coding downstream 996510 35236348 ~ 35242028 (+)
XLOC_002277 NA non-coding downstream 1129754 35369592 ~ 35414277 (+)
XLOC_002282 BX663516.1 non-coding downstream 1404881 35644719 ~ 35644798 (+)

Expression


Co-expression Network