XLOC_022762 (si:ch211-37e10.2)


Basic Information

Item Value
gene id XLOC_022762
gene name si:ch211-37e10.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 6107901 ~ 6118349 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00045271
TGCTTACATCCCTCAAACAATTACATAAATGTTGGTGGATGattaaaatgcatacaaatatGTTTCGCAAGCAAGCATCGTTAATGTCCAAAAAAGTTAGGACAGAAATATTGTGCTCATGCTTATGCTGTCAAAATGTTCCCTAGATAGGGTACTCGCTAGTTTTTAGAACACAGCCCACAACATTTTCTCCTTCAGAAGTGTTTGGAgaggcacacacacatacacacacacacacacattgcagtGAAGTAGAGATGCTCACCTCCCGCTGTTTATATTTCCCTGACATTCCAACAGAAGACAGCTGCAGGTGGATAAATGAACGAACAATGCCATCATTGAGAAAGACGCTGCTGCTGATGATTTATGTGTTATGCGCGTTCCGCTCCGCGCGCTCGGGAGACTCTGGAGACGCCAGACCCTGCTCCGGATCACACTGTCCGGGGCATAGAACGCACAAACCGTCGCGACAACACAACCCGACGACACATGGTAGATCAATAAATCAACACCATCCTCACTCAAGCTTTCCATCAGAAAATCACGCAACGCTTCTGTCCCAGCGCGGGCGGTCTGGAGACCAGACAAGGGAAAGCGTCCAGACGCGCGTGCCTGGAGGTTTTGTTCCTGTGTGCGCAGATTGCGTTAGACCAGATCATGTAAAGAACGACACCGGTGAATGTAAAGGAATTGAGTGCCGTCTGCCTCTGAGGATACGCAGACCCTGTGCTGGAGAAGGGTGTGTGCCCGGGACGAGCCAACCTCCCCTCGTCCATGTGGCAGACAGAGCCGCTCAGTTTCTGGGGGAATTTCCGGACATTGGATATCCTGCATCAGAGTCCGGGGCTCCTCTGGGAGTTCAGCTCACTTGTGACATCAAACCAGGAGAGAATGAAGTACCTGCAGAGGATGCACTTATCCTACATCTACAGCTGGCGAAGGGACAAGAGAAGCTCGTGGAGGCTTTGAGAGCTCAGCAAGGGGTGATTCGTGATCTGCAGAAGAGGCTGGTGGACCAGCAGGAGACCCTTCTCTCCCAGCAGCGAGAGATCCTCGACCAGCAGCGTCGCATGTTTGAGCAGATGGATGTGGTGAAAGTTCAGTACGGTCTGCTTTCTGACACCATCAAGCAAGTCTCTTTCCAAGGCCTGCAGGGAGAACTGCAAAGCTATTTCGAAAGTCACCTGACGAGTCTTCAGAACCAAGCACGGAGTCATCTGCAAAAATCTTATGCCGTGCATAAGGTTGATGTGGACGCCAAGGTGATGAATGTTGTTGGGGATTCAGGGCACCCATTGTTGGGCTGCCAAACGATATGTGGGCCTGAAGAATTCTGCGACTTCCAGAAGGATCAACCACAGTGTGAAAAGTGCACCGTGTGTCCACCTGGATTCTTTCTGGTGTCACAGTGCTCGCCCACCGCTGATAGGATGTGCCAGGACAGGGATGAGTGCCTAGAATTACCAAGCTTGTGTGGAGAGCGAGTAAAATGTCTCAATACTCCAGGAGGGTTTCGTTGTCTTGGTGTCTCAGAGAGGGAGATTTCCACAGGACTGTGTGGTCTTGAGTACTTCTACAATCAAGAACTTCAGGAGTGCCAGGCTTGTTCAGATTGCGATGGTGAGCCGGTTGCCGTTCCCTGCACCTCCACCAGTGACGCTGTATGTGGAAGTGTGTCTGAGAACATGCTCTCATTGTCTTGGGCTGCTTCAATTATCATACCACCAATTAAACTGAGGAGTACCTCCATCTACCCAGGGCTACAGCTTAAAATCCGTGGCAAAGAAGGAAACAACCTACTGATTAACCATGATGATTACCTCAACCTCCAACAACATGGACTTGTCTGGATAGATTACAACTTTGCACTAAAGCACAGCTGCAGGAACTTTCTCCAGGTTGGGATACGAATAAACGGTAGTGAAGAGGAAGGACACGATCTAAGCGGGGTTCGAATTGAGCAACCTGAACGAAAGTTCTTCCAGGGTGTGACTGTAAGTGCTGCAGCCGAAGTGGAACCAAATCAGAATCTTACACTAGTTCTGAAGAGTCCTAACCAATACTGCAATCAGAGTAAAGATATCCAAGTCTACGAGCTTGGAGGTGCTtcgttcagcttgctctggcttTCCCATGACACTGGTGCTGTGGCCATGACTGCTCAGATGTCCACAGCAGCCCATTACCAGAGTAACTACCGTCCAACTTTCCGTATTTCCACTGTCTCTGATCCCTACATTGTGTCACTGACTCATGACAGCCGTGGGGTGCGCTTCATGGAGAGCGGTGTGGTGAAATTTGTGCTCCAACAGGCTGTCTATTCCATGGGCCACACATGTGTTCGAGAAGGTTTCTCACTGATTGCATATGTCAGCCGAAATGGCACTAACCAGGAGATATTGCGCTCTTTCAAGTCTGGTGTTAACTACAGGGACACCTCTATCACTCTTTCTGGAGCCACAAGGGTAGACAGTGAAGACTGGCTCAATTTTGAGATTGTCGCTCCATCTCAGTGCAATGTCCGTTACTTTGGCGATAGCTCTGGTATTAGTATGCTGAGCTTGATCTGGATCCCTACCACAGTGTCCTCCACATTCACGGCCACTGTCTCTAGAACAGGTCTACCCACTGGGGCAGTTCGAAACAAACCCCTGTTCTTCAGGCAAATGAGTCCAAATACCGAGCAAATGCGGTTAGCTGCATCAAGTGAGCCATATGCTCATAGGAACTTTTTGTTTACTGAGGTTGGGACAGTCAGTGTAGCCCTCAACCTAAAACTGATTCATTCCTGCAATGTGGTAAAGCTGACCCTTTACCGGCAGAGTATGGATGGAGGTCAGCCTACACCATTGAGCCAGCAAGTGGGTGGACATATGCCTGAAGGCAGTGAGTGGGCCAGCGTAGGGCTGAGAACTTCCTTCGATGTTCAGAATGGCACTGCCATCTATGTTTCCCTAGACTGTGTTCGTGGACGAATCAACCAGATTACCCATGAGAGTGGGACCAACATCTCCATTCTTTGGATGGCATCATAACATACAAAGTAGAAACAGTTATATATGGAAGGATTatgtaaagggttagttcacccagaaatgaaaactaTGCTATTAATTATTCAACCTGATGTTGTTCCAACCCCCTGACACTCTTCATCAGAATACAAATGAAGGTATTTTAGATTCATTCTTGGAGCTATCTCGTCCTCTATTGACAGCAATGGTTACAAGACCTTGAAAGGacccaaaaacattgtcaaaacattccatgtgacgtcagtggttcaactgtaatatgaagctccaagaactcTTTTGTGCACCatgaaaactgtaaaaacaactttgttctCCAGTGTCTTCTATATCAGATCAGGGTGCACATTTACTATGGACAAAACCATTAGTGTCGCGCTGCTGAATGCTGAAAATAtccaaaaaaatgtacaaaaaaaaggcAGCTGTAGTTGCCAAACTTTACATAAACTAccacatttaattaatttgtattgttGATTCCCTG

Function

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-131121-415 Predicted to enable calcium ion binding activity.

Ensembl:

ensembl_id ENSDARG00000096932

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00045271 True 3525 mRNA 0.48 5 6107901 6118349

Neighbor

gene id symbol gene type direction distance location
XLOC_022761 NA coding upstream 18648 6082660 ~ 6089253 (+)
XLOC_022760 CR385039.1 coding upstream 44116 6063671 ~ 6063785 (+)
XLOC_022759 abi1a coding upstream 95115 5935377 ~ 6012786 (+)
XLOC_022758 pimr64 coding upstream 189146 5912635 ~ 5918755 (+)
XLOC_022757 mastl coding upstream 199660 5893134 ~ 5908241 (+)
XLOC_022763 CR352329.1 coding downstream 235045 6353394 ~ 6359270 (+)
XLOC_022764 NA coding downstream 271086 6389435 ~ 6399785 (+)
XLOC_022765 BX120013.1 coding downstream 286845 6405194 ~ 6405316 (+)
XLOC_022766 CR790361.1 coding downstream 463703 6582052 ~ 6582168 (+)
XLOC_022767 si:dkeyp-101e12.1 coding downstream 1035279 7153628 ~ 7158301 (+)
XLOC_022748 NA non-coding upstream 1140652 4960973 ~ 4967249 (+)
XLOC_022747 NA non-coding upstream 1599311 4504746 ~ 4508590 (+)
XLOC_022744 CU462914.1 non-coding upstream 1951502 4154959 ~ 4156399 (+)
XLOC_022770 NA non-coding downstream 1434950 7553299 ~ 7557890 (+)
XLOC_022777 NA non-coding downstream 2124675 8243024 ~ 8245079 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000327_00038705_00044856 NA coding CI01000327 null 38303 ~ 46091 (+)