LOC110523433 (LOC106567986)


Basic Information

Item Value
gene id LOC110523433
gene name LOC106567986
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 22179675 ~ 22191846 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036977055.1
cacacacacacacacacacgtgcacgcacacacacacactgccccgaCAAGTttcagaggggtgtgtgtgtagtagttcCTTCATACTGAATCAGCTCGGACAGCCTGTGTGTGTTAGCGGTCCTCTTTCCTTGATTTCTCTAGGTAGAATATTTGAATCTTACTttgacacagagaggagaccattATTTTGCCGATTTGGTCCTGATCCATCCCAGTTTTGACAAAGCTGAAAGAATCCCCTTGGTACAAGACTCGCTCGTCATTGGAAGTTCTGCCTTTACCCATTAGAGTGCTCTTTCATCATTCAGTATATCTCAGCTACTCCAACTGAAGAGACCATTTCTTATTTCCTGGATAAAGTTTTGGTGCTGCGTTTTCTTTGACGCAGTGAATGCCACGGCACAGATAGACACACAGGAGAATGTCGGTGAATCTAAGTAAAAACGGAGCAGCACTCACGGCCGCGTATAAAGAAGTGGTGGATGTGAAGTCTGATACCAACTGGACTCTGTTCACCTATGAGGGGAACACCAATGACATCCGCCTGGCAGAGAAGGGAGACGGCGGTCtggaggagatggtggaggagtTGAGCAGTGGGAAGGTGATGTATGCCTTCTGTCGTGTCAAGGACCCCAACTCTGGCCTGTGTAAATATGTCCTCATCAACTGGacagGTGAAGGGGTAAAGGACTCTCGGAAAGGACAGTGCGCCAACCATGTCATTTCCATGGGTAACTTCCTAAGGGGTGCCCATGTGACCATCAATGCACGGGGGGAGGATGACGTGGAGCCAGAGAGCATCATGGATAAAGTGGCCAAGGCGTCGGGGGCCAACTTTAACTTTCGCAAAGAGACACAGAAATACAGCGATGTACCCAGTGGACCtgtggGGTCGGTGTACCAGAAGACTAATGCTGTGGATGAGATTCTGCAAACCAAAGAGACACAGAAATATGACATACCCAGAGGGCCtgtgGGGTCGGTGTACCAGAAGACTAATGCTGTGGATGAGATTCTGCAAACCAACAAGGACAACTTCTGGGCCCAATCTCAGagagatGAGGAGGTACGTCAGAAggaggagagcaagagagtggaggaggagaggcaaaGGGTGAAAAGAGAgcaaaaagagagggatgaaaaggaggctgcagagagagaaatgagggcaAAGGAGAGAACCTCTCAAATCGACCAGGCAAAGACTTACCAGAAGCAGCAGGAGTCAGGGTATAGAGACCAGGAACAACATCAGCCGGAGCAGCAGGACAGTGAGCGTCAGAACTCTCAGAGGATAAGACCTGCATCTGTACAAAAAGCAAACgaggcAGCACGTCTGATCTCCCAAAGGTCCTTGAACCCCAGAGAGCTGTTTaaaaagagagagcagagtgcCTCACTGGACAACACGCCCAGCTCCAGACCTGggAAGCTGCAGAGCCACTTCCTGACTCAGAAGTCCACTGAGAGAGAAACACCCAACGAACCACGTTCCCCACAATACCCTGCTTTTCTTCACCCAGAAGCCCTGGCTTCACTGCTCCCAAAAACACCTGCTCTGCTCTCAGAGCCCAAGGCACAGGCAGCCCCACTCTCACCTGTCCAACCCGCAGAGTCTTCCTTCACTGAAGAGGAGTACTGGTCAGATGATTTTGATGATGATACACAGGACACAGCACCAGAGGACGAGCCAACAGTTGCCGGCCTGGTTCAGGGTAGAGAGAGGCACATTGACCTAGATGAGGTATACGAGCTCCTGCCATTGGCAGCAACAAATGAGGAGGATAACATTTATGATGATATCTACCAGGACACACCCACAGtgctggagcagagagaggaggccagTGGACAGGATGTGCGTGCCAGGGCTCTGTATGACTACCAAGCCActgACGACTCTGAGATTACCTTTGATCCTGATGACATCATCACAGGGATAGAcATGGAGGATGAGGGTTGGTGGAGAGGCTACGGACCGGATGGACACTACGGAATGTTCCCTGCTAATTACGTTGAGCTCCTGTAGTTCCAAAGCCCTCCCACATGCCTACAACCAATTAGAGCATCAGATCATTCTGACTGCGACCAATGCGAACAATACAGGGGTAGGAAGGGGGATGTTTTTCTCTCTGCACAGATATTAGGTTTATAAGTAGAAAGAGAAGAGAATGGGGGTGCAGGGCTTATCAGGGATGTCAGGGAAAGTGACTGTCACTTGATTACTGTATTTTAATGTACAACAGAGCTCATGTCAGTGTATTCTAGTCTTTATGATTGTCTGGTTTTAGTCAGGTCTCAGACTAGCAGTCTTCTATGGGATTATGGGGATGTTTGGGGTTTTATATGTGTCTTGAATTTGTCAGACTTTTGCTTTTGATCCACTTTTCAATAAATAAAGATGAATGTCCAACTGTT
>XM_036977057.1
cacacacacacacacacacgtgcacgcacacacacacactgccccgaCAAGTttcagaggggtgtgtgtgtagtagttcCTTCATACTGAATCAGCTCGGACAGCCTGTGTGTGTTAGCGGTCCTCTTTCCTTGATTTCTCTAGGTAGAATATTTGAATCTTACTttgacacagagaggagaccattATTTTGCCGATTTGGTCCTGATCCATCCCAGTTTTGACAAAGCTGAAAGAATCCCCTTGGTACAAGACTCGCTCGTCATTGGAAGTTCTGCCTTTACCCATTAGAGTGCTCTTTCATCATTCAGTATATCTCAGCTACTCCAACTGAAGAGACCATTTCTTATTTCCTGGATAAAGTTTTGGTGCTGCGTTTTCTTTGACGCAGTGAATGCCACGGCACAGATAGACACACAGGAGAATGTCGGTGAATCTAAGTAAAAACGGAGCAGCACTCACGGCCGCGTATAAAGAAGTGGTGGATGTGAAGTCTGATACCAACTGGACTCTGTTCACCTATGAGGGGAACACCAATGACATCCGCCTGGCAGAGAAGGGAGACGGCGGTCtggaggagatggtggaggagtTGAGCAGTGGGAAGGTGATGTATGCCTTCTGTCGTGTCAAGGACCCCAACTCTGGCCTGTGTAAATATGTCCTCATCAACTGGacagGTGAAGGGGTAAAGGACTCTCGGAAAGGACAGTGCGCCAACCATGTCATTTCCATGGGTAACTTCCTAAGGGGTGCCCATGTGACCATCAATGCACGGGGGGAGGATGACGTGGAGCCAGAGAGCATCATGGATAAAGTGGCCAAGGCGTCGGGGGCCAACTTTAACTTTCGCAAAGAGACACAGAAATACAGCGATGTACCCAGTGGACCtgtggGGTCGGTGTACCAGAAGACTAATGCTGTGGATGAGATTCTGCAAACCAAAGAGACACAGAAATATGACATACCCAGAGGGCCtgtgGGGTCGGTGTACCAGAAGACTAATGCTGTGGATGAGATTCTGCAAACCAACAAGGACAACTTCTGGGCCCAATCTCAGagagatGAGGAGGTACGTCAGAAggaggagagcaagagagtggaggaggagaggcaaaGGGTGAAAAGAGAgcaaaaagagagggatgaaaaggaggctgcagagagagaaatgagggcaAAGGAGAGAACCTCTCAAATCGACCAGGCAAAGACTTACCAGAAGCAGCAGGAGTCAGGGTATAGAGACCAGGAACAACATCAGCCGGAGCAGCAGGACAGTGAGCGTCAGAACTCTCAGAGGATAAGACCTGCATCTGTACAAAAAGCAAACgaggcAGCACGTCTGATCTCCCAAAGGTCCTTGAACCCCAGAGAGCTGTTTaaaaagagagagcagagtgcCTCACTGGACAACACGCCCAGCTCCAGACCTGggAAGCTGCAGAGCCACTTCCTGACTCAGAAGTCCACTGAGAGAGAAACACCCAACGAACCACGTTCCCCACAATACCCTGCTTTTCTTCACCCAGAAGCCCTGGCTTCACTGCTCCCAAAAACACCTGCTCTGCTCTCAGAGCCCAAGGCACAGGCAGCCCCACTCTCACCTGTCCAACCCGCAGAGTCTTCCTTCACTGAAGAGGAGTACTGGTCAGATGATTTTGATGATGATACACAGGACACAGCACCAGAGGACGAGCCAACAGTTGCCGGCCTGGTTCAGGGTAGAGAGAGGCACATTGACCTAGATGAGGTATACGAGCTCCTGCCATTGGCAGCAACAAATGAGGAGGATAACATTTATGATGATATCTACCAGGACACACCCACAagagaggaggccagTGGACAGGATGTGCGTGCCAGGGCTCTGTATGACTACCAAGCCActgACGACTCTGAGATTACCTTTGATCCTGATGACATCATCACAGGGATAGAcATGGAGGATGAGGGTTGGTGGAGAGGCTACGGACCGGATGGACACTACGGAATGTTCCCTGCTAATTACGTTGAGCTCCTGTAGTTCCAAAGCCCTCCCACATGCCTACAACCAATTAGAGCATCAGATCATTCTGACTGCGACCAATGCGAACAATACAGGGGTAGGAAGGGGGATGTTTTTCTCTCTGCACAGATATTAGGTTTATAAGTAGAAAGAGAAGAGAATGGGGGTGCAGGGCTTATCAGGGATGTCAGGGAAAGTGACTGTCACTTGATTACTGTATTTTAATGTACAACAGAGCTCATGTCAGTGTATTCTAGTCTTTATGATTGTCTGGTTTTAGTCAGGTCTCAGACTAGCAGTCTTCTATGGGATTATGGGGATGTTTGGGGTTTTATATGTGTCTTGAATTTGTCAGACTTTTGCTTTTGATCCACTTTTCAATAAATAAAGATGAATGTCCAACTGTT
>XM_036977056.1
acacacacacacacacacacgtgcacgcacacacacacactgccccgaCAAGTttcagaggggtgtgtgtgtagtagttcCTTCATACTGAATCAGCTCGGACAGCCTGTGTGTGTTAGCGGTCCTCTTTCCTTGATTTCTCTAGGTAGAATATTTGAATCTTACTttgacacagagaggagaccattATTTTGCCGATTTGGTCCTGATCCATCCCAGTTTTGACAAAGCTGAAAGAATCCCCTTGGTACAAGACTCGCTCGTCATTGGAAGTTCTGCCTTTACCCATTAGAGTGCTCTTTCATCATTCAGTATATCTCAGCTACTCCAACTGAAGAGACCATTTCTTATTTCCTGGATAAAGTTTTGGTGCTGCGTTTTCTTTGACGCAGTGAATGCCACGGCACAGATAGACACACAGGAGAATGTCGGTGAATCTAAGTAAAAACGGAGCAGCACTCACGGCCGCGTATAAAGAAGTGGTGGATGTGAAGTCTGATACCAACTGGACTCTGTTCACCTATGAGGGGAACACCAATGACATCCGCCTGGCAGAGAAGGGAGACGGCGGTCtggaggagatggtggaggagtTGAGCAGTGGGAAGGTGATGTATGCCTTCTGTCGTGTCAAGGACCCCAACTCTGGCCTGTGTAAATATGTCCTCATCAACTGGacagGTGAAGGGGTAAAGGACTCTCGGAAAGGACAGTGCGCCAACCATGTCATTTCCATGGGTAACTTCCTAAGGGGTGCCCATGTGACCATCAATGCACGGGGGGAGGATGACGTGGAGCCAGAGAGCATCATGGATAAAGTGGCCAAGGCGTCGGGGGCCAACTTTAACTTTCGCAAAGAGACACAGAAATACAGCGATGTACCCAGTGGACCtgtggGGTCGGTGTACCAGAAGACTAATGCTGTGGATGAGATTCTGCAAACCAAAGAGACACAGAAATATGACATACCCAGAGGGCCtgtgGGGTCGGTGTACCAGAAGACTAATGCTGTGGATGAGATTCTGCAAACCAACAAGGACAACTTCTGGGCCCAATCTCAGagagatGAGGAGGTACGTCAGAAggaggagagcaagagagtggaggaggagaggcaaaGGGTGAAAAGAGAgcaaaaagagagggatgaaaaggaggctgcagagagagaaatgagggcaAAGGAGAGAACCTCTCAAATCGACCAGGCAAAGACTTACCAGAAGCAGCAGGAGTCAGGGTATAGAGACCAGGAACAACATCAGCCGGAGCAGCAGGACAGTGAGCGTCAGAACTCTCAGAGGATAAGACCTGCATCTGTACAAAAAGCAAACgaggcAGCACGTCTGATCTCCCAAAGGTCCTTGAACCCCAGAGAGCTGTTTaaaaagagagagcagagtgcCTCACTGGACAACACGCCCAGCTCCAGACCTGggAAGCTGCAGAGCCACTTCCTGACTCAGAAGTCCACTGAGAGAGAAACACCCAACGAACCACGTTCCCCACAATACCCTGCTTTTCTTCACCCAGAAGCCCTGGCTTCACTGCTCCCAAAAACACCTGCTCTGCTCTCAGAGCCCAAGGCACAGGCAGCCCCACTCTCACCTGTCCAACCCGCAGAGTCTTCCTTCACTGAAGAGGAGTACTGGTCAGATGATTTTGATGATGATACACAGGACACAGCACCAGAGGACGAGCCAACAGTTGCCGGCCTGGTTCAGGGTAGAGAGAGGCACATTGACCTAGATGAGGTATACGAGCTCCTGCCATTGGCAGCAACAAATGAGGAGGATAACATTTATGATGATATCTACCAGGACACACCCACAcagagagaggaggccagTGGACAGGATGTGCGTGCCAGGGCTCTGTATGACTACCAAGCCActgACGACTCTGAGATTACCTTTGATCCTGATGACATCATCACAGGGATAGAcATGGAGGATGAGGGTTGGTGGAGAGGCTACGGACCGGATGGACACTACGGAATGTTCCCTGCTAATTACGTTGAGCTCCTGTAGTTCCAAAGCCCTCCCACATGCCTACAACCAATTAGAGCATCAGATCATTCTGACTGCGACCAATGCGAACAATACAGGGGTAGGAAGGGGGATGTTTTTCTCTCTGCACAGATATTAGGTTTATAAGTAGAAAGAGAAGAGAATGGGGGTGCAGGGCTTATCAGGGATGTCAGGGAAAGTGACTGTCACTTGATTACTGTATTTTAATGTACAACAGAGCTCATGTCAGTGTATTCTAGTCTTTATGATTGTCTGGTTTTAGTCAGGTCTCAGACTAGCAGTCTTCTATGGGATTATGGGGATGTTTGGGGTTTTATATGTGTCTTGAATTTGTCAGACTTTTGCTTTTGATCCACTTTTCAATAAATAAAGATGAATGTCCAACTGTT
>XM_036977058.1
CAAGAATGCTTGTAGTTGTTGATTTATTGCTATATGTTCTGTGTTTCTTGTAAGGGGTGTAAAATGACCTAACTCTTTCAACActgcttttttttaaatgaattgagAAATAAAGGAatggactgggagggagagataaaggagaggatATAAAGAAAAGTGGGGAGAGGGGGGCACTCATATGAAGGATAAAAGTGAGAGTTATAGTTTTACTATGAGTCTGTCGTGTTTTACCTTCTGCAACGAACTCTCTCTGTCTGACATAACTCTCCCAATCCGGTATGTGATGCTGGGGACGTCTATGACTGACTGCctgctgacaaacacacacaaacgttgTTTGCCAAAAAACACTGGAGATTGGTGGCTAGAAGAAAAAGGACTCTGTTCACCTATGAGGGGAACACCAATGACATCCGCCTGGCAGAGAAGGGAGACGGCGGTCtggaggagatggtggaggagtTGAGCAGTGGGAAGGTGATGTATGCCTTCTGTCGTGTCAAGGACCCCAACTCTGGCCTGTGTAAATATGTCCTCATCAACTGGacagGTGAAGGGGTAAAGGACTCTCGGAAAGGACAGTGCGCCAACCATGTCATTTCCATGGGTAACTTCCTAAGGGGTGCCCATGTGACCATCAATGCACGGGGGGAGGATGACGTGGAGCCAGAGAGCATCATGGATAAAGTGGCCAAGGCGTCGGGGGCCAACTTTAACTTTCGCAAAGAGACACAGAAATACAGCGATGTACCCAGTGGACCtgtggGGTCGGTGTACCAGAAGACTAATGCTGTGGATGAGATTCTGCAAACCAAAGAGACACAGAAATATGACATACCCAGAGGGCCtgtgGGGTCGGTGTACCAGAAGACTAATGCTGTGGATGAGATTCTGCAAACCAACAAGGACAACTTCTGGGCCCAATCTCAGagagatGAGGAGGTACGTCAGAAggaggagagcaagagagtggaggaggagaggcaaaGGGTGAAAAGAGAgcaaaaagagagggatgaaaaggaggctgcagagagagaaatgagggcaAAGGAGAGAACCTCTCAAATCGACCAGGCAAAGACTTACCAGAAGCAGCAGGAGTCAGGGTATAGAGACCAGGAACAACATCAGCCGGAGCAGCAGGACAGTGAGCGTCAGAACTCTCAGAGGATAAGACCTGCATCTGTACAAAAAGCAAACgaggcAGCACGTCTGATCTCCCAAAGGTCCTTGAACCCCAGAGAGCTGTTTaaaaagagagagcagagtgcCTCACTGGACAACACGCCCAGCTCCAGACCTGggAAGCTGCAGAGCCACTTCCTGACTCAGAAGTCCACTGAGAGAGAAACACCCAACGAACCACGTTCCCCACAATACCCTGCTTTTCTTCACCCAGAAGCCCTGGCTTCACTGCTCCCAAAAACACCTGCTCTGCTCTCAGAGCCCAAGGCACAGGCAGCCCCACTCTCACCTGTCCAACCCGCAGAGTCTTCCTTCACTGAAGAGGAGTACTGGTCAGATGATTTTGATGATGATACACAGGACACAGCACCAGAGGACGAGCCAACAGTTGCCGGCCTGGTTCAGGGTAGAGAGAGGCACATTGACCTAGATGAGGTATACGAGCTCCTGCCATTGGCAGCAACAAATGAGGAGGATAACATTTATGATGATATCTACCAGGACACACCCACAGtgctggagcagagagaggaggccagTGGACAGGATGTGCGTGCCAGGGCTCTGTATGACTACCAAGCCActgACGACTCTGAGATTACCTTTGATCCTGATGACATCATCACAGGGATAGAcATGGAGGATGAGGGTTGGTGGAGAGGCTACGGACCGGATGGACACTACGGAATGTTCCCTGCTAATTACGTTGAGCTCCTGTAGTTCCAAAGCCCTCCCACATGCCTACAACCAATTAGAGCATCAGATCATTCTGACTGCGACCAATGCGAACAATACAGGGGTAGGAAGGGGGATGTTTTTCTCTCTGCACAGATATTAGGTTTATAAGTAGAAAGAGAAGAGAATGGGGGTGCAGGGCTTATCAGGGATGTCAGGGAAAGTGACTGTCACTTGATTACTGTATTTTAATGTACAACAGAGCTCATGTCAGTGTATTCTAGTCTTTATGATTGTCTGGTTTTAGTCAGGTCTCAGACTAGCAGTCTTCTATGGGATTATGGGGATGTTTGGGGTTTTATATGTGTCTTGAATTTGTCAGACTTTTGCTTTTGATCCACTTTTCAATAAATAAAGATGAATGTCCAACTGTT

Function

NR:

description
drebrin-like protein B isoform X1

GO: NA

KEGG:

id description
K20520 DBNL, ABP1; drebrin-like protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036977055.1 False 2427 mRNA 0.49 17 22179675 22188902
XM_036977057.1 False 2415 mRNA 0.49 17 22179675 22188902
XM_036977056.1 False 2419 mRNA 0.49 17 22179675 22188903
XM_036977058.1 True 2300 mRNA 0.48 17 22179675 22191846

Neighbor

gene id symbol gene type direction distance location
LOC110523434 LOC106567989 coding downstream 353 22177265 ~ 22179322 (-)
LOC110523430 LOC106567981 coding downstream 91809 22067901 ~ 22087866 (-)
march5 march5 coding downstream 134183 22042781 ~ 22045492 (-)
LOC110523428 LOC105015193 coding downstream 141727 22033823 ~ 22037948 (-)
LOC110523426 LOC106567959 coding downstream 158115 22003337 ~ 22021560 (-)
LOC110516770 LOC106568012 coding upstream 32687 22224533 ~ 22231921 (-)
LOC110522825 LOC106568017 coding upstream 168402 22360248 ~ 22439554 (-)
LOC110523438 LOC106568028 coding upstream 343745 22535591 ~ 22539412 (-)
c5h2orf42 cssa01h2orf42 coding upstream 519887 22711733 ~ 22717155 (-)
LOC110523441 LOC106568058 coding upstream 529980 22721826 ~ 22730043 (-)
G379518 NA non-coding downstream 8197 22171197 ~ 22171478 (-)
G379514 NA non-coding downstream 18942 22160506 ~ 22160733 (-)
G379512 NA non-coding downstream 23080 22156388 ~ 22156595 (-)
G379434 NA non-coding downstream 111989 22066983 ~ 22067686 (-)
G379433 NA non-coding downstream 113466 22064742 ~ 22066209 (-)
G379550 NA non-coding upstream 47301 22239147 ~ 22239393 (-)
G379552 NA non-coding upstream 53188 22245034 ~ 22245423 (-)
G379556 NA non-coding upstream 165218 22357064 ~ 22358086 (-)
G379698 NA non-coding upstream 312016 22503862 ~ 22506136 (-)
G379745 NA non-coding upstream 425566 22617412 ~ 22662248 (-)
G378359 NA other downstream 387682 21791662 ~ 21791993 (-)
G377991 NA other downstream 1149892 21029458 ~ 21029783 (-)
G377809 LOC106568602 other downstream 1474535 20704613 ~ 20705140 (-)
G377800 NA other downstream 1484967 20694096 ~ 20694708 (-)
jmy LOC106568093 other upstream 607854 22799696 ~ 22859199 (-)
LOC110522831 LOC106563032 other upstream 1355354 23488916 ~ 23556681 (-)
G380610 LOC106567829 other upstream 1517952 23709798 ~ 23711891 (-)
G380648 NA other upstream 1567193 23759039 ~ 23761807 (-)
LOC110523492 LOC106567536 other upstream 3247175 25437411 ~ 25441794 (-)

Expression


Co-expression Network