G379433


Basic Information

Item Value
gene id G379433
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 22064742 ~ 22066209 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU431310
tgggtaggcgtgtccaaacattttgactggtactatatatagtgtgtgtgtgtatatatatataaaatggtgtgTATAGGCAGTATGAACAGTATATGAATATAAaaggtatgtacagcagtagttatatagaatgaGCCTTGACAGgaatacagtatacatatgaagtgtgtaaaacattatgtaaacatttttaaagtgaccagtgttcagtgACTAtatacatagggcagcagtctctaaagtGCAGGGTAGACAACCTGGTGGCTCTCAATTGAGTATCTGTAGAAGTTTGAAGGTCTTAAAGGCCAAGACAAATtcattcagcctcctgaggttgaagaggctctgtttcaccacactgtctgtgtgaagggaccatttcaggttgtcagggATGTGCATGCAATTCAACCTGAAGCTTATATGACAGCTGTCTCTCTAACGTCAGAATAACCCTGTTGGCACTGACAGCCCTTcctctcagtcactctctctgtgACAACAGTAGACAAATCTATAAGCTATTCACCAATCAGAGATCAGTCTGAAATACGCTGATacttctgtcagagagagagagagagagtgggatagattgaggccgagcgagagagagggggagagagagagcttgagagacagaaaaagagcgagagacagaatgacacagaaagagagagggggggtagattGAGAccaagcgagagagacagacagagagacagagagagaggaataaggACACCATGGAGTGCAGGTGGGTGCTGGGTGTCCAGCAGTGAGCCAGGGGCTAGACGGTGACTGGCAGCTGTGTCTGGCTGGAGAGGGAGTCCCTGGTGCTGCTGACGCATTGCAGACGGATCACAGGCACACAGAGCAGGCTGACTGGACTGGCTGTCTGGTCAACTGGCTGTCTTGCTGACTGAGGGCTGGCTGGtctactgtatatctgtctgggtggctggctggcatgttggctgtctggctggctggtctAATGTTTACTGTATCTGTctgtggctgactggctggctgcctggtttgCTATCTGGCTGGCtgatctactgtatatctgtctgGGTGGCCGACTGTCTGGCTGGCCTACTGTAAATCTTCATCATGAATCCACATCAACTTTATGATTGTACAAAACTGTGGAAATTATGTAaaacaaataatatatatatacatcttgTATCTGATTTTATATTTAAAAGGTATATTTTCATTGTGGTTCCTGAGGCAGATTCTTCTTCTGTGTTCCGTTTTTTGTTTAAACTGCAAAGACTGACATCCCACTTGATTTTGTGTATCTGTAATTTCAGATATGGAGTGTTTTGTTTTAAATTTAGCTGGTTTTAATGTTCCGAATCCTATTGTTTGTAATGTCTTGTTAattggtgttggaccccaggaagataaGCTAGCGTTATGGcattagctaatggggatcctaataaaaatt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU431310 True 1468 lncRNA 0.44 1 22064742 22066209

Neighbor

gene id symbol gene type direction distance location
march5 march5 coding downstream 19250 22042781 ~ 22045492 (-)
LOC110523428 LOC105015193 coding downstream 26794 22033823 ~ 22037948 (-)
LOC110523426 LOC106567959 coding downstream 43182 22003337 ~ 22021560 (-)
LOC110523425 NA coding downstream 105300 21957792 ~ 21959442 (-)
LOC118964574 NA coding downstream 298601 21760374 ~ 21766141 (-)
LOC110523430 LOC106567981 coding upstream 1692 22067901 ~ 22087866 (-)
LOC110523434 LOC106567989 coding upstream 111119 22177265 ~ 22179322 (-)
LOC110523433 LOC106567986 coding upstream 113466 22179675 ~ 22191846 (-)
LOC110516770 LOC106568012 coding upstream 158324 22224533 ~ 22231921 (-)
LOC110522825 LOC106568017 coding upstream 294039 22360248 ~ 22439554 (-)
G379438 NA non-coding downstream 4404 22059942 ~ 22060338 (-)
G379437 NA non-coding downstream 5304 22059201 ~ 22059438 (-)
G379436 NA non-coding downstream 5917 22058552 ~ 22058825 (-)
G379423 NA non-coding downstream 22468 22041949 ~ 22042274 (-)
G379421 NA non-coding downstream 25939 22038565 ~ 22038803 (-)
G379434 NA non-coding upstream 774 22066983 ~ 22067686 (-)
G379512 NA non-coding upstream 90179 22156388 ~ 22156595 (-)
G379514 NA non-coding upstream 94297 22160506 ~ 22160733 (-)
G379518 NA non-coding upstream 104988 22171197 ~ 22171478 (-)
G379550 NA non-coding upstream 172938 22239147 ~ 22239393 (-)
G378359 NA other downstream 272749 21791662 ~ 21791993 (-)
G377991 NA other downstream 1034959 21029458 ~ 21029783 (-)
G377809 LOC106568602 other downstream 1359602 20704613 ~ 20705140 (-)
G377800 NA other downstream 1370034 20694096 ~ 20694708 (-)
G374786 NA other downstream 3505575 18558140 ~ 18559167 (-)
jmy LOC106568093 other upstream 733491 22799696 ~ 22859199 (-)
LOC110522831 LOC106563032 other upstream 1480991 23488916 ~ 23556681 (-)
G380610 LOC106567829 other upstream 1643589 23709798 ~ 23711891 (-)
G380648 NA other upstream 1692830 23759039 ~ 23761807 (-)

Expression


Co-expression Network