LOC110523438 (LOC106568028)


Basic Information

Item Value
gene id LOC110523438
gene name LOC106568028
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 22535591 ~ 22539412 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021602122.2
CATCAGCCCTTCTCATTTTTAACCAACTATTGGACGGCGGCTCGCTTACATCGAAGGTCCGCTTGTGATCTCACACACTCGAGGATGTGTGAGTgctggagaaacagagagagtgcgCTATAGACTGGAGCCGTGAGAGTCCGTATTTTGGAACCTATACACTTTGGCTATACTTATTCTGCAACTGAATTGTATGCATATATTTCGCTCACATCCCGATTGATGTGGATTTTGTGAATTAGAACCCCCGGAAGAACAATTCTGGAATAGGCATCATGAGTGAAGAACCGAACGTCAACTTCTGTAAAATGAAACTAGATGGGGAGTAGGCTACAGGCGTTCTCTAGCGGATTATAATTCAACTTTACACTGCGCATGGATAATTATACACTTTACTTTTCCGGGACTTTAACAAAGCACGGCCCCTCTCCACCATATTTTCGTTTCCCTCCCCAATTAAATATTTCTCTTTTGGATCTATTACGAACGAGATACGCAGCCATACCTCCGAATCCTGTGACAGTAGGGATAACTGCAGCTCCCCAACAGGCGCGTTAGTGTTTTCATCGACTCTTTTGGATCCTATTCGCCAGGCAAAGCAGCTCCCAATCCGGATACTCAAGATGTTGACGGCGCACACCAGCCACTTGCTCCACCACCCGGAATACCTGCAGCCCCTGCAATCTGCACCAGTGAGCATTGAGCTGGATGCCAAGAAGAGTCCCCTGGCCCTGCTGGCTCAGACCTGCTCCCAGATCGGCAAGCCTGACCCTCCCTCCTCCAAACTAAGCTCTATCTCTAATGGCCATGGTGACCATGATGgacactcctcttcctcctcctccagtcaCAAACTGGGGGAGCACCGGCCCTCACAGGAGGACAAGTCCAGCTTCAAGCCCTATAACAAAGTAGGGGGTGACAGTCGGAGAGACAGGGTTTGTAGCTCTAATAACAGTTCTGACAAGACAGGCTTCAGGGTACCTAGTAATGGGAATGGAGGAGCTAACAGTAACTTATCAGGTTCTTGTCCATCCTTTCCACCACACGCCATCTCTCCCAACTCCAGGGTGGGTAGTGGCACGCCTCCTCAGCACACACAGCAGtcgtcacagacacacagacagagccagTCGCCTCACGGACTACATGTTTCCCACTCTCAGACTCTGAATGGAGAACACAAACAGGAACAGAGCAGTCCACACGGGAacagcaacagtagcagcagcagtggcggCCATCTTAAGAAGGAGTCAGATGTGAATAAGGTCAGTTTGGACAGTCCCCAGATGGCTAACTCCAGCCATGCCAGAGCCAGCACCAACTCCAGCACAGGAAGCTCTGAGGGAAGCCCCAGCCATGAGTTTGGCAAGATGGACTCCCAACCCCCACCACTCAGCCTGGGTCCTGGACATATCACTCCCATCTCTCCCTACAAGACTGGCCACTCTGtcttccccctgtcctcctctggTATGGGCTACCATGGCTCTGTAGTGGGGGCCTATGCTGGATATCCCTCCCAGTTTGTCCCAGGGTTGGACCCTACCAAGTCTGGtctgggaggagggggggtgagggTACCGGGGAAGCACCATAGCTCCAGCCCCCTCACtggtacctctcccctctccttcatgCAGGGCTTGTGCAGGGATCCGTACTGCCTCAGCTACCCTAACTCACCCCACCTGGGGGGAAACAATCCCTGCGTCCATGACCCCTCCTCATCCATCAAATCAGGCTATCCAGGCTTGGTCTacccctcccaccccctccaCTCCTTCCACCCCAGCACTATGTCTTCCAGCATCACCCCCACCCTGTCCCACCCCCTCTACACCTACGGCTTCATGCTCTCCAATGACCCCATCCCTCATGCCTGTAACTGGGTATCAGCTGGGGGTCCTTGTGATAAACGCTTCTCCACCTCAGACGAGCTACTAGCCCACCTGCGCACACACACCTCCTTACCTGGAGGGATGGACAGTAAGATATTCTCtgcctacccctctctctcctcctctgctgccTCTTgccacctccacctcccccacGAGAGCCAGGCCTCCTTGCAGAACTCATTCTCCCTCAGGGCTCCTCATACCCTGGGTCTGGCCCGGTACCACCCCTATGGTAAGGTCCACCTGCCCCCTGGacctacctccatccccctgcACTCCCTCCAGGCTGGTTCTCCTTACTACCCCCACTATGCTCTCTATAGCCAGAGACTTGGCTCAGCGTCTGCCCTGGGCTATCAGTGAttctccatccatccacacagtCTATAACAGTGTTTCTCCTCAAATTACTAAGCCAAGGCAGCTCTCCCACTCCTTCCTGCCTCGCTCTGCTGCTCCCTGCCTAAAACTGATGGAATCTTTGGATCCAATTGGTTTTAATAGAAATGTTCTGTAAGCCCTGGATGAAGGTGTTTCTGGAGCTTCTGCGGGTAGCACATCTTGCCTATATGGGGGATCACTACTACTCCATACCAAAGCAGGATTCTATGGAGGAGCCAGAGAAGGGTCTGGATGCTTGCATGTCTGCACACTAGGATGCTGCACTTTATGAACAAGTGGGTTTGACTGGACCAGTGGACATGGTGCCATGTTGGGTTGTAATAGCATCACAGACTGGGCTGGCTGATAGCTGGTGGTAGGATGCTGTAGAACGCCTCCTGGATCTCTTCATGTCAAGTTGGGAATAGTGATTGCAgtggaaagacaggagaggagatagTGATGGCATTAACCTATAGCACTATGGGGGGAGGCACGGGGAGAATCGGATGCATGCTAGCTTGACCCTGAATGTGAGTTTAGCTCAGTTATGGTTTTGAGATTTGTTTCAGTTTCATACATTTTGCTTCTTCTTTGACTGAAAAtagaaattgtatttattttttaactgagTGCTTTGGCTTTCAAGTTTACTTTCCAAAACATACATTTGAACTTTTCTTATTATTATTTTGCAGTTATACAGTTATCATTTTATCTATTATGAACAGGATTTGTTTAAAAACGCTAAAAACATTCACTCATGCAAACTTTACAACAAAGTAGATTTTCTTCTCCTTACAAAAGTATGTGGTTTTCTTGTTTTCCTATCCTTCTATGAATGAATGTGGATgtcacatctctttctctccctctctggcttcCTAATAGTGAaaggaaatgtgatattttttgTAAAGTTTTTGACAGAATGACCTGGGTAAGAGAGCGATACGAACCCAAACACAGTAAGCAAAGATTGTGTGATGATGGCAGAGCTGTCCGATTTTAAAGGCAAGGTCATATTTTGTTTAATAAATGATAATGAATATA

Function

NR:

description
zinc finger protein 703-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021602122.2 True 3341 mRNA 0.50 2 22535591 22539412

Neighbor

gene id symbol gene type direction distance location
LOC110522825 LOC106568017 coding downstream 96037 22360248 ~ 22439554 (-)
LOC110516770 LOC106568012 coding downstream 303670 22224533 ~ 22231921 (-)
LOC110523433 LOC106567986 coding downstream 343745 22179675 ~ 22191846 (-)
LOC110523434 LOC106567989 coding downstream 356269 22177265 ~ 22179322 (-)
LOC110523430 LOC106567981 coding downstream 447725 22067901 ~ 22087866 (-)
c5h2orf42 cssa01h2orf42 coding upstream 172321 22711733 ~ 22717155 (-)
LOC110523441 LOC106568058 coding upstream 182414 22721826 ~ 22730043 (-)
trnag-ccc NA coding upstream 190816 22730228 ~ 22730298 (-)
dtwd2 dtwd2 coding upstream 191651 22731063 ~ 22742599 (-)
si:ch1073-398f15.1 LOC106568085 coding upstream 217692 22757104 ~ 22761497 (-)
G379698 NA non-coding downstream 29455 22503862 ~ 22506136 (-)
G379556 NA non-coding downstream 177505 22357064 ~ 22358086 (-)
G379552 NA non-coding downstream 290168 22245034 ~ 22245423 (-)
G379550 NA non-coding downstream 296198 22239147 ~ 22239393 (-)
G379518 NA non-coding downstream 364113 22171197 ~ 22171478 (-)
G379745 NA non-coding upstream 78000 22617412 ~ 22662248 (-)
G379822 NA non-coding upstream 214857 22754269 ~ 22755650 (-)
G379824 NA non-coding upstream 224254 22763666 ~ 22763918 (-)
G379828 NA non-coding upstream 227198 22766610 ~ 22766875 (-)
G379863 NA non-coding upstream 361056 22900468 ~ 22901152 (-)
G378359 NA other downstream 743598 21791662 ~ 21791993 (-)
G377991 NA other downstream 1505808 21029458 ~ 21029783 (-)
G377809 LOC106568602 other downstream 1830451 20704613 ~ 20705140 (-)
G377800 NA other downstream 1840883 20694096 ~ 20694708 (-)
jmy LOC106568093 other upstream 260288 22799696 ~ 22859199 (-)
LOC110522831 LOC106563032 other upstream 1007788 23488916 ~ 23556681 (-)
G380610 LOC106567829 other upstream 1170386 23709798 ~ 23711891 (-)
G380648 NA other upstream 1219627 23759039 ~ 23761807 (-)
LOC110523492 LOC106567536 other upstream 2899609 25437411 ~ 25441794 (-)

Expression


Co-expression Network