haus4 (LOC106567141)


Basic Information

Item Value
gene id haus4
gene name LOC106567141
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 30244530 ~ 30257109 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021602459.2
ATCAGATGACTGTTTGGACAGAAGCGCGGGAGCTGGAGAAGGAAGTTGCTAGCTCAGCTCAGTCAATTGTTATTTGCATCCAAGTTTGGTCGCCAAcgattttattttgttttgtcaatATGTTCTGCTATACCCTGTGAGCGTCTTTGTATGTCTGGTGAGGAGGGGTCTTTGGTCAAGTGATGATGTCCACGTATGATGATTCTGCGAGTGTTCCATCACTGGGAAAAGCAGACGACTTGCATCAACAAGTCCTTGCCTCATTCCCACTGTGTCAGCTGACAGAAGAAGACCTGACCCAGCATCCTCTATTCTGCAAGCTCCTGGCAACGCTGTCACAGCATGTGGACCGCACTGGCCTTACTGTCACACTGAAGAGAGAGCTGGAGAAGGCTGAGAGGGACCTGCAGACACAGAGGCTTAGCTGGCTGTGCTCAGAGAGCATGTACAGGCTACTGCAGGAGATGATCCAGGAGCACTGTGTCAGAAAGCATCACTCCACTGTGGCCCCAGAGGACGGCACGTTCTATGAAACTGTGGAGCAGTGTCTGGTGGTGGCCCAGTGTGTCAGGCAGCTGAACCCGAGTGCCACCGCGAGCCAGGACCAGCCCCCTGTTCTAGGACTGAGTGCCCAACAGGTGCTCGAGCTGATGCCACAAGAGCAGGATGTATGGAAAATGAAACAGCGACTGCCTAGAGAACTAGAAAAGCATCTGAAGAAGAAATGTTTCAGCGTCCTCTCCTACTATCAGCCTAAATGGGAGGATGAGAGTGAAGGGCTGAAGAACATGAAGCTGTCTCGCTTGTCTGGCCTcctggagagagaaaggaaaagagCAGAGAGTCTGAAGGAGAAGTGCCGTGAGAGTGCCTCCCTGCTGCAAAGGCAGACTCACTGCTACCTCTCTGAGCTGTTAGGGTGCATCCAGATTCTCCAGTCTCTGATCCTGGACCACAGGCTGAAAGCCCAGAAAGAGCTGGACAGGAAAAAGATTGATTACTTTGAGGCCAAATGTGAGATCATCATGCAGAAGATCAGAGCTGAGATGTTGGAAATTCAGCTAGATACCTACACAGCAGACACAATATCTGCCCATAAAAAAATAAGGGAGAAGCTGGAAACGGAGCTGAATGCCTCCCAGTTAGAGAAGCAGTCTGTGGAGTGCAAACTTTCGTCCTTTGAGATATTTGGCAAGGAATTTGAGGCTCTAGCTGAGGAATATTCCAGACTGCGTCAGGAGATTGACACCAAGAGTTGGGCTCTGAAGGAATTCTCTCAGCACACGGACTGACTCGGAATTGACATCAGACAGTTCTGTTTCAGAAAAACACAGTTAAGAGTCTTGTCCGGATGTTTTCAAGAGAATTTTCTTCACACTTTTGTTGACTAGCTATCTCCATAGTGTAAAATTATGGTTTTGATTGTTTTTTGTTATAAAATGTATGATTACCTGGTGGTGTTTTGATTGTTGTTCAGTTTAATAATCCCACTCTGATATAGCATAACAGTACATTCAGAATCCTACATTTTCATGtaattgttggcatttcctgcctaaattTTCCCACTTTGCtaatgaagtaatcattaaaataattggcaacatcaaatggttttgtgatgaataaaccATTTCATTTGATGAAAaaa
>XM_036977264.1
TTCTGGGAATTAAAAAAGTCAAGACAATTAGTATTACTCAGTACACGGTGTAGGCCTGTCATTCTTATATAGCTAACGGAATGAGTCCATTTGGCACTCTAGTGTAGTCACGACCGTGCATGCTGAAGTGTGTCAAATAAGACATCGAAGACTCACAGGGCAGCACATATGCGTGGAGCCCAAGAATGCcggtaattttttattttaccagGAGCGTCTTTGTATGTCTGGTGAGGAGGGGTCTTTGGTCAAGTGATGATGTCCACGTATGATGATTCTGCGAGTGTTCCATCACTGGGAAAAGCAGACGACTTGCATCAACAAGTCCTTGCCTCATTCCCACTGTGTCAGCTGACAGAAGAAGACCTGACCCAGCATCCTCTATTCTGCAAGCTCCTGGCAACGCTGTCACAGCATGTGGACCGCACTGGCCTTACTGTCACACTGAAGAGAGAGCTGGAGAAGGCTGAGAGGGACCTGCAGACACAGAGGCTTAGCTGGCTGTGCTCAGAGAGCATGTACAGGCTACTGCAGGAGATGATCCAGGAGCACTGTGTCAGAAAGCATCACTCCACTGTGGCCCCAGAGGACGGCACGTTCTATGAAACTGTGGAGCAGTGTCTGGTGGTGGCCCAGTGTGTCAGGCAGCTGAACCCGAGTGCCACCGCGAGCCAGGACCAGCCCCCTGTTCTAGGACTGAGTGCCCAACAGGTGCTCGAGCTGATGCCACAAGAGCAGGATGTATGGAAAATGAAACAGCGACTGCCTAGAGAACTAGAAAAGCATCTGAAGAAGAAATGTTTCAGCGTCCTCTCCTACTATCAGCCTAAATGGGAGGATGAGAGTGAAGGGCTGAAGAACATGAAGCTGTCTCGCTTGTCTGGCCTcctggagagagaaaggaaaagagCAGAGAGTCTGAAGGAGAAGTGCCGTGAGAGTGCCTCCCTGCTGCAAAGGCAGACTCACTGCTACCTCTCTGAGCTGTTAGGGTGCATCCAGATTCTCCAGTCTCTGATCCTGGACCACAGGCTGAAAGCCCAGAAAGAGCTGGACAGGAAAAAGATTGATTACTTTGAGGCCAAATGTGAGATCATCATGCAGAAGATCAGAGCTGAGATGTTGGAAATTCAGCTAGATACCTACACAGCAGACACAATATCTGCCCATAAAAAAATAAGGGAGAAGCTGGAAACGGAGCTGAATGCCTCCCAGTTAGAGAAGCAGTCTGTGGAGTGCAAACTTTCGTCCTTTGAGATATTTGGCAAGGAATTTGAGGCTCTAGCTGAGGAATATTCCAGACTGCGTCAGGAGATTGACACCAAGAGTTGGGCTCTGAAGGAATTCTCTCAGCACACGGACTGACTCGGAATTGACATCAGACAGTTCTGTTTCAGAAAAACACAGTTAAGAGTCTTGTCCGGATGTTTTCAAGAGAATTTTCTTCACACTTTTGTTGACTAGCTATCTCCATAGTGTAAAATTATGGTTTTGATTGTTTTTTGTTATAAAATGTATGATTACCTGGTGGTGTTTTGATTGTTGTTCAGTTTAATAATCCCACTCTGATATAGCATAACAGTACATTCAGAATCCTACATTTTCATGtaattgttggcatttcctgcctaaattTTCCCACTTTGCtaatgaagtaatcattaaaataattggcaacatcaaatggttttgtgatgaataaaccATTTCATTTGATGAAAaaa

Function

NR:

description
HAUS augmin-like complex subunit 4

GO:

id name namespace
GO:0051225 spindle assembly biological_process
GO:0070652 HAUS complex cellular_component

KEGG:

id description
K16587 HAUS4; HAUS augmin-like complex subunit 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021602459.2 False 1651 mRNA 0.46 10 30244530 30255397
XM_036977264.1 True 1724 mRNA 0.46 10 30244530 30257109

Neighbor

gene id symbol gene type direction distance location
LOC110523594 LOC106567038 coding downstream 1158 30218103 ~ 30243372 (-)
LOC118964583 NA coding downstream 64912 30177488 ~ 30179618 (-)
LOC110524741 LOC106567126 coding downstream 110993 30109646 ~ 30133537 (-)
surf2 LOC106567032 coding downstream 139842 30102342 ~ 30104688 (-)
LOC110523585 LOC106567027 coding downstream 145242 30096053 ~ 30099288 (-)
LOC110523598 LOC106565912 coding upstream 598433 30855542 ~ 31286199 (-)
LOC110522855 LOC103355419 coding upstream 1339949 31597058 ~ 31597647 (-)
LOC110523605 LOC106565751 coding upstream 1522156 31779265 ~ 31942907 (-)
LOC110523606 LOC106565750 coding upstream 1829128 32086237 ~ 32151031 (-)
LOC110523607 kad coding upstream 1903064 32160173 ~ 32171800 (-)
G387938 NA non-coding downstream 26564 30212692 ~ 30217966 (-)
G387939 LOC106567059 non-coding downstream 32644 30168119 ~ 30211886 (-)
G387816 NA non-coding downstream 384704 29844443 ~ 29859826 (-)
G387728 NA non-coding downstream 535517 29708790 ~ 29709013 (-)
G387724 NA non-coding downstream 543225 29701076 ~ 29701305 (-)
G388003 NA non-coding upstream 19983 30277092 ~ 30277316 (-)
G388006 NA non-coding upstream 22696 30279805 ~ 30280114 (-)
G388014 NA non-coding upstream 26220 30283329 ~ 30283585 (-)
G388020 NA non-coding upstream 29661 30286770 ~ 30287340 (-)
G388043 NA non-coding upstream 43128 30300237 ~ 30300535 (-)
LOC110523591 LOC102784149 other downstream 416222 29821413 ~ 29831150 (-)
G387321 LOC100136012 other downstream 599782 29603183 ~ 29644748 (-)
G387052 LOC106566935 other downstream 809219 29434605 ~ 29435311 (-)
G387064 NA other downstream 849714 29393095 ~ 29394816 (-)
G392227 NA other upstream 3094308 33351417 ~ 33352338 (-)
G392245 NA other upstream 3123683 33380792 ~ 33381565 (-)
G392503 LOC106565394 other upstream 3477053 33734162 ~ 33762381 (-)
G392858 NA other upstream 3890354 34147463 ~ 34148628 (-)
G395297 NA other upstream 5595681 35852790 ~ 35853357 (-)

Expression


Co-expression Network