G367650


Basic Information

Item Value
gene id G367650
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 11777962 ~ 11778302 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU417870
ttgggcgtgcaaaattattcagcccctttactttcagtgcagcaaactctctccaaaagttcagtgaggatctctgaatgatccaatgttgacctaaattactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgattgtctcagaggtccgtcaaaagcgcagagagcatcatgaagaacaaggaacacatcaggcaggtccgagatactgttgtgaagatgtttaaagccggatttggatacaaaaatatttcccaagctttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaa

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU417870 True 341 lncRNA 0.41 1 11777962 11778302

Neighbor

gene id symbol gene type direction distance location
trnaa-agc-2 NA coding upstream 176430 11601460 ~ 11601532 (+)
LOC110523192 plk2 coding upstream 264700 11507689 ~ 11513262 (+)
LOC110524952 NA coding upstream 270678 11502643 ~ 11507284 (+)
LOC110523188 pde4d coding upstream 359029 11026101 ~ 11418933 (+)
depdc1b depdc1b coding upstream 773321 10984720 ~ 11004641 (+)
phax phax coding downstream 25618 11803920 ~ 11808076 (+)
lmnb1 lmnb1 coding downstream 54607 11832909 ~ 11854832 (+)
LOC110523202 NA coding downstream 141436 11919738 ~ 11922926 (+)
megf10 megf10 coding downstream 168699 11947001 ~ 12051563 (+)
prrc1 prrc1 coding downstream 278650 12056952 ~ 12093392 (+)
G367649 NA non-coding upstream 104 11777594 ~ 11777858 (+)
G367646 NA non-coding upstream 2956 11774710 ~ 11775006 (+)
G367644 NA non-coding upstream 8752 11768951 ~ 11769210 (+)
G367641 NA non-coding upstream 11291 11766417 ~ 11766671 (+)
G367640 LOC106571245 non-coding upstream 11727 11765765 ~ 11766235 (+)
G367653 NA non-coding downstream 6902 11785204 ~ 11785709 (+)
G367654 aldh7a1 non-coding downstream 8953 11787255 ~ 11805366 (+)
G367663 LOC106571668 non-coding downstream 30980 11809282 ~ 11810342 (+)
G367670 NA non-coding downstream 39545 11817847 ~ 11818188 (+)
G367682 cssa01h5orf63 non-coding downstream 102027 11880329 ~ 11883213 (+)
G366973 NA other upstream 349252 11425642 ~ 11428710 (+)
G366748 NA other upstream 800810 10976682 ~ 10977152 (+)
G365197 NA other upstream 1928808 9848703 ~ 9849154 (+)
G364850 NA other upstream 2548731 9228838 ~ 9229231 (+)
cdc42se2 cdc42se2 other upstream 2931846 8775134 ~ 8849107 (+)
G367684 NA other downstream 100027 11878329 ~ 11880035 (+)
G368440 NA other downstream 1330394 13108696 ~ 13109134 (+)
G369763 NA other downstream 1986945 13765247 ~ 13769296 (+)
G370360 NA other downstream 2477501 14255803 ~ 14259133 (+)
G370382 smarcb1 other downstream 2542802 14321104 ~ 14325895 (+)

Expression


Co-expression Network