Gene
RNA
| Item | Value |
|---|---|
| gene id | G502610 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 37103006 ~ 37103337 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU570807 | True | 332 | lncRNA | 0.44 | 1 | 37103006 | 37103337 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525880 | casp3 | coding | downstream | 12 | 37097779 ~ 37102994 (-) |
| ncaph | LOC106585119 | coding | downstream | 25291 | 37068792 ~ 37077715 (-) |
| vamp8 | LOC106585118 | coding | downstream | 37976 | 37050701 ~ 37065030 (-) |
| vamp5 | LOC106585117 | coding | downstream | 55729 | 37037439 ~ 37047277 (-) |
| trnag-ccc-2 | NA | coding | downstream | 114911 | 36988025 ~ 36988095 (-) |
| LOC110525881 | LOC106585120 | coding | upstream | 57042 | 37160379 ~ 37193152 (-) |
| ogfod2 | ogfod2 | coding | upstream | 237368 | 37340705 ~ 37344084 (-) |
| LOC110525887 | LOC106585127 | coding | upstream | 365421 | 37468758 ~ 37482116 (-) |
| zmat4a | zmat4 | coding | upstream | 525458 | 37628795 ~ 37778250 (-) |
| sfrp1a | LOC106585130 | coding | upstream | 721717 | 37825054 ~ 37842809 (-) |
| G502598 | NA | non-coding | downstream | 11884 | 37090863 ~ 37091122 (-) |
| G502593 | NA | non-coding | downstream | 18770 | 37083919 ~ 37084236 (-) |
| G502591 | NA | non-coding | downstream | 23384 | 37079418 ~ 37079622 (-) |
| G502562 | LOC106580507 | non-coding | downstream | 84177 | 37015347 ~ 37018829 (-) |
| G502530 | NA | non-coding | downstream | 170654 | 36932097 ~ 36932352 (-) |
| G503009 | NA | non-coding | upstream | 7540 | 37110877 ~ 37111089 (-) |
| G503011 | NA | non-coding | upstream | 9066 | 37112403 ~ 37112708 (-) |
| G503065 | NA | non-coding | upstream | 135854 | 37239191 ~ 37239488 (-) |
| G503063 | NA | non-coding | upstream | 137741 | 37241078 ~ 37241193 (-) |
| G503108 | NA | non-coding | upstream | 151513 | 37254850 ~ 37255220 (-) |
| hk2 | LOC106585103 | other | downstream | 585738 | 36507843 ~ 36569143 (-) |
| G501142 | NA | other | downstream | 1335077 | 35765366 ~ 35767929 (-) |
| G498960 | NA | other | downstream | 3061832 | 34040359 ~ 34041174 (-) |
| LOC110525812 | LOC103397138 | other | downstream | 3766226 | 33332650 ~ 33336818 (-) |
| G503064 | NA | other | upstream | 136507 | 37239844 ~ 37240937 (-) |
| G503159 | LOC106580514 | other | upstream | 228147 | 37331484 ~ 37336552 (-) |
| nsmfb | nsmf | other | upstream | 1851533 | 38926899 ~ 38967540 (-) |
| G505472 | NA | other | upstream | 2102541 | 39205878 ~ 39206269 (-) |
| G505493 | ptch1 | other | upstream | 2129356 | 39232693 ~ 39233210 (-) |
