XLOC_025630 (BX537310.1)


Basic Information

Item Value
gene id XLOC_025630
gene name BX537310.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 41500409 ~ 41500525 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050475
GactacagccatatcaccctgcagcccaagactggttattCACTgatgctaagcagggctgagcctggtcagtacctggatgggagaccactagggaacactaggttgctgttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000105854

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050475 True 117 rRNA 0.53 1 41500409 41500525

Neighbor

gene id symbol gene type direction distance location
XLOC_025629 NA coding upstream 433995 41043023 ~ 41066414 (+)
XLOC_025628 NA coding upstream 551410 40945040 ~ 40948999 (+)
XLOC_025627 NA coding upstream 598252 40898624 ~ 40902157 (+)
XLOC_025626 mmd2a coding upstream 629043 40841897 ~ 40871366 (+)
XLOC_025625 arpc1b coding upstream 679797 40809011 ~ 40820612 (+)
XLOC_025631 card11 coding downstream 58157 41558682 ~ 41632059 (+)
XLOC_025632 gna12a coding downstream 147112 41647637 ~ 41706238 (+)
XLOC_025633 eif3ba coding downstream 214441 41714966 ~ 41724932 (+)
XLOC_025634 chst12a coding downstream 225835 41726360 ~ 41732947 (+)
XLOC_025635 lfng coding downstream 416974 41917499 ~ 41926869 (+)
XLOC_025429 BX649540.1 misc upstream 11251373 30248739 ~ 30249036 (+)
XLOC_025623 BX649559.1 non-coding upstream 705530 40791720 ~ 40794879 (+)
XLOC_025619 NA non-coding upstream 1095470 40404169 ~ 40404939 (+)
XLOC_025636 NA non-coding downstream 454368 41954893 ~ 41962746 (+)
XLOC_025639 NA non-coding downstream 693685 42194210 ~ 42206974 (+)
XLOC_025640 NA non-coding downstream 989934 42490459 ~ 42497766 (+)
XLOC_025642 NA non-coding downstream 1006957 42507482 ~ 42509830 (+)
XLOC_025643 NA non-coding downstream 1254132 42754657 ~ 42755168 (+)

Expression


Co-expression Network