zgc:92591 (LOC105019623)


Basic Information

Item Value
gene id zgc:92591
gene name LOC105019623
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 71461083 ~ 71462587 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036986121.1
GTCCATTAATTAATGGCCACTTAAAAACAGGTTGTGACAGCTTGATGAGGCGGAAATGACAGATGACTAGACAACAACAGTGCTGACAGCATTATACATATAATCACGGTTGCGCTGTATCTAGAGTTTCAGAAATGAGTAACGATGTAACCAAGAAAAAGGGAAAGGCAGTCGGGGAGAAAAAGACTAAAAGAAAAGCCAAGAGGAGAGAGACTTATGCAGTGTATATCTATAAAGTTTTGAAGCAGgTCCATCCTGACACTGGCATCTCCAGCAGAGCAATGAGCATAATGAATTCCTTCGTCAACGACGTGTTTGAGCGTATTGCAACTGAGGCATCTCGTCTGACCCAGTACAACAAACGCTCAACCATCACCAGCCGAGAGGTACAGACCGCAGTCCGACTCTTGCTACCTGGAGAGCTGGCCAAGCACGCAGTGTCAGAGGGCACCAAAGCTGTCACCAAATACACTAGTTCAAAGTAGAAAATGAGTGCATCAAATGCTGCAAGAATGCAATTAAGGCTATGGATGCACCACTAAGTATAAGTTGAATCATTATTTTTGGAAAATAAATGCACTaaattgattttttggggggggtttccCATGATTAAATGTTTCTGCAATTTT

Function

NR:

description
PREDICTED: late histone H2B.L4

GO:

id name namespace
GO:0006334 nucleosome assembly biological_process
GO:0000786 nucleosome cellular_component
GO:0005634 nucleus cellular_component
GO:0003677 DNA binding molecular_function
GO:0046982 protein heterodimerization activity molecular_function

KEGG:

id description
K11252 H2B; histone H2B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036986121.1 True 632 mRNA 0.43 3 71461083 71462587

Neighbor

gene id symbol gene type direction distance location
LOC110530476 LOC106569351 coding downstream 24346 71434344 ~ 71436737 (-)
LOC118965547 LOC106610709 coding downstream 64467 71394099 ~ 71396616 (-)
LOC110530974 LOC106569121 coding downstream 349059 71092167 ~ 71112024 (-)
LOC110530472 NA coding downstream 377817 71020813 ~ 71083266 (-)
LOC110530470 pcmd1 coding downstream 460370 70982334 ~ 71000713 (-)
LOC110530478 LOC106599847 coding upstream 178843 71641430 ~ 71649971 (-)
abcb8 LOC106569347 coding upstream 191164 71653751 ~ 71659992 (-)
LOC118936275 LOC100136187 coding upstream 233115 71695702 ~ 71697473 (-)
LOC100136187 LOC100136187 coding upstream 242409 71704996 ~ 71706543 (-)
LOC110530481 LOC100136187 coding upstream 251173 71713760 ~ 71716272 (-)
G743302 NA non-coding downstream 14405 71445721 ~ 71446678 (-)
G743275 LOC106569352 non-coding downstream 48830 71408929 ~ 71412253 (-)
G743129 NA non-coding downstream 266427 71175950 ~ 71194656 (-)
G743110 NA non-coding downstream 327112 71133762 ~ 71133971 (-)
G743108 NA non-coding downstream 328122 71132688 ~ 71132961 (-)
G743394 NA non-coding upstream 117888 71580475 ~ 71638545 (-)
G743401 NA non-coding upstream 123747 71586334 ~ 71586829 (-)
G743396 NA non-coding upstream 177127 71639714 ~ 71640799 (-)
G743425 NA non-coding upstream 196554 71659141 ~ 71659396 (-)
G743442 NA non-coding upstream 202460 71665047 ~ 71665840 (-)
G743076 NA other downstream 390001 71070634 ~ 71071082 (-)
G742383 LOC106569128 other downstream 618626 70835358 ~ 70842457 (-)
G742038 NA other downstream 935132 70519387 ~ 70525951 (-)
LOC110530449 NA other downstream 1260805 70198887 ~ 70200278 (-)
LOC110530971 NA other downstream 1300245 70148848 ~ 70160838 (-)
G743421 NA other upstream 212858 71675445 ~ 71675785 (-)
G743447 NA other upstream 216098 71678685 ~ 71682299 (-)
G743450 NA other upstream 222603 71685190 ~ 71715625 (-)
G743961 NA other upstream 714997 72177584 ~ 72177867 (-)
G744129 NA other upstream 861605 72324192 ~ 72324992 (-)

Expression


Co-expression Network