XLOC_002870


Basic Information

Item Value
gene id XLOC_002870
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 32676810 ~ 32678245 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005772
TGGGTTTAGAATATACAGGGTCATAAATTAACCCTTTTATAAATGCACAACTGCAAAAATGCTAGGaaataacaacatgaaagcctCCTAAACCCATGTTTGTCATGACTTTTGTCATCCTACTATCATTGCTGGatcaagtgcaggttgccagattattaacccttttaaaatgcacaaaatatACTTTGAAGTACTGaccatatttattattgttttagaaTATGTTAGTTCAGCTGAGGGTTGCCAGATGTTGTCATTAACCCTTGAACATTAAAATACTTACATGGTACATAAAGCTTTTTTGCTTAAATGCTTCCATGATTTGAAGGACAAATCAT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005772 True 341 lncRNA 0.33 2 32676810 32678245

Neighbor

gene id symbol gene type direction distance location
XLOC_002869 atg101 coding downstream 13051 32657496 ~ 32663759 (-)
XLOC_002868 umodl1 coding downstream 36869 32613706 ~ 32639941 (-)
XLOC_002866 mogat2 coding downstream 66034 32534814 ~ 32610776 (-)
XLOC_002867 NA coding downstream 85348 32584685 ~ 32591462 (-)
XLOC_002865 dgat2 coding downstream 152039 32501961 ~ 32524771 (-)
XLOC_002871 NA coding upstream 101635 32779880 ~ 32780290 (-)
XLOC_002872 trim37 coding upstream 131375 32809620 ~ 32851847 (-)
XLOC_002873 rabgef1 coding upstream 176656 32854901 ~ 32880298 (-)
XLOC_002874 kctd7 coding upstream 203341 32881586 ~ 32890617 (-)
XLOC_002875 NA coding upstream 216752 32894997 ~ 32896944 (-)
XLOC_002863 NA non-coding downstream 425964 32216413 ~ 32250846 (-)
XLOC_002862 NA non-coding downstream 592186 32077811 ~ 32084624 (-)
XLOC_002858 NA non-coding downstream 1381804 31262852 ~ 31295006 (-)
XLOC_002854 CT737197.1 non-coding downstream 2145553 30531143 ~ 30531257 (-)
XLOC_002877 NA non-coding upstream 480344 33158589 ~ 33164573 (-)
XLOC_002883 dre-mir-454a non-coding upstream 698573 33376818 ~ 33376941 (-)
XLOC_002884 dre-mir-301a non-coding upstream 698756 33377001 ~ 33377086 (-)

Expression


Co-expression Network