XLOC_002884 (dre-mir-301a)


Basic Information

Item Value
gene id XLOC_002884
gene name dre-mir-301a
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 33377001 ~ 33377086 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005330
GCTGTTAACAGGTGCTCTGACTTCATTGCACTACTGTATTGGACAGCTAGCAGTGCAATAGTATTGTCAAAGCGTCTGAGAGCAGC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000083420

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005330 True 86 miRNA 0.47 1 33377001 33377086

Neighbor

gene id symbol gene type direction distance location
XLOC_002883 dre-mir-454a coding downstream 60 33376818 ~ 33376941 (-)
XLOC_002881 c2cd2 coding downstream 33757 33305978 ~ 33343244 (-)
XLOC_002880 PRDM15 coding downstream 79137 33269371 ~ 33297864 (-)
XLOC_002879 tbl2 coding downstream 111435 33253952 ~ 33265566 (-)
XLOC_002878 bcl7ba coding downstream 125125 33240410 ~ 33251876 (-)
XLOC_002885 dre-mir-130a coding upstream 44 33377130 ~ 33377214 (-)
XLOC_002886 il2rga coding upstream 167243 33544329 ~ 33557299 (-)
XLOC_002887 si:dkey-18a10.3 coding upstream 184481 33561567 ~ 33572441 (-)
XLOC_002888 eva1c coding upstream 203199 33580285 ~ 33588310 (-)
XLOC_002889 hunk coding upstream 237291 33614377 ~ 33621739 (-)
XLOC_002877 NA non-coding downstream 212428 33158589 ~ 33164573 (-)
XLOC_002875 NA non-coding downstream 480057 32894997 ~ 32896944 (-)
XLOC_002871 NA non-coding downstream 596711 32779880 ~ 32780290 (-)
XLOC_002870 NA non-coding downstream 698756 32676810 ~ 32678245 (-)
XLOC_002890 NA non-coding upstream 286079 33663165 ~ 33664789 (-)
XLOC_002891 BX569785.1 non-coding upstream 499045 33876131 ~ 33880364 (-)
XLOC_002900 NA non-coding upstream 819696 34196782 ~ 34198566 (-)
XLOC_002902 BX510654.1 non-coding upstream 950176 34327262 ~ 34327394 (-)

Expression


Co-expression Network