XLOC_002885 (dre-mir-130a)


Basic Information

Item Value
gene id XLOC_002885
gene name dre-mir-130a
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 33377130 ~ 33377214 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005331
TGTCTGTCCAGTGCCCCTTTTATATTGTACTACTGATAACCCAGTTATTAAAGCAGTGCAATGTTAAAAGGGCATTGGCCAGGGA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000082938

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005331 True 85 miRNA 0.42 1 33377130 33377214

Neighbor

gene id symbol gene type direction distance location
XLOC_002884 dre-mir-301a coding downstream 44 33377001 ~ 33377086 (-)
XLOC_002883 dre-mir-454a coding downstream 189 33376818 ~ 33376941 (-)
XLOC_002881 c2cd2 coding downstream 33886 33305978 ~ 33343244 (-)
XLOC_002880 PRDM15 coding downstream 79266 33269371 ~ 33297864 (-)
XLOC_002879 tbl2 coding downstream 111564 33253952 ~ 33265566 (-)
XLOC_002886 il2rga coding upstream 167115 33544329 ~ 33557299 (-)
XLOC_002887 si:dkey-18a10.3 coding upstream 184353 33561567 ~ 33572441 (-)
XLOC_002888 eva1c coding upstream 203071 33580285 ~ 33588310 (-)
XLOC_002889 hunk coding upstream 237163 33614377 ~ 33621739 (-)
XLOC_002890 NA coding upstream 285951 33663165 ~ 33664789 (-)
XLOC_002877 NA non-coding downstream 212557 33158589 ~ 33164573 (-)
XLOC_002875 NA non-coding downstream 480186 32894997 ~ 32896944 (-)
XLOC_002871 NA non-coding downstream 596840 32779880 ~ 32780290 (-)
XLOC_002891 BX569785.1 non-coding upstream 498917 33876131 ~ 33880364 (-)
XLOC_002900 NA non-coding upstream 819568 34196782 ~ 34198566 (-)
XLOC_002902 BX510654.1 non-coding upstream 950048 34327262 ~ 34327394 (-)
XLOC_002906 CT573139.2 non-coding upstream 1573846 34951060 ~ 34959178 (-)

Expression


Co-expression Network