XLOC_002883 (dre-mir-454a)


Basic Information

Item Value
gene id XLOC_002883
gene name dre-mir-454a
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 33376818 ~ 33376941 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005329
ttgcaGGTCGTTTAAGAATTAATCCTAATTCTTGGGACCCTATCAGTATTGCCTCTGCTGTCCACTGTGTTCAGAGTAGTGCAATATTGCTAATAGGGTTTTAGGTTTTAGGTTGTACCTTCAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000082262

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005329 True 124 miRNA 0.40 1 33376818 33376941

Neighbor

gene id symbol gene type direction distance location
XLOC_002881 c2cd2 coding downstream 33574 33305978 ~ 33343244 (-)
XLOC_002880 PRDM15 coding downstream 78954 33269371 ~ 33297864 (-)
XLOC_002879 tbl2 coding downstream 111252 33253952 ~ 33265566 (-)
XLOC_002878 bcl7ba coding downstream 124942 33240410 ~ 33251876 (-)
XLOC_002877 NA coding downstream 212245 33158589 ~ 33164573 (-)
XLOC_002884 dre-mir-301a coding upstream 60 33377001 ~ 33377086 (-)
XLOC_002885 dre-mir-130a coding upstream 189 33377130 ~ 33377214 (-)
XLOC_002886 il2rga coding upstream 167388 33544329 ~ 33557299 (-)
XLOC_002887 si:dkey-18a10.3 coding upstream 184626 33561567 ~ 33572441 (-)
XLOC_002888 eva1c coding upstream 203344 33580285 ~ 33588310 (-)
XLOC_002875 NA non-coding downstream 479874 32894997 ~ 32896944 (-)
XLOC_002871 NA non-coding downstream 596528 32779880 ~ 32780290 (-)
XLOC_002870 NA non-coding downstream 698573 32676810 ~ 32678245 (-)
XLOC_002867 NA non-coding downstream 785356 32584685 ~ 32591462 (-)
XLOC_002890 NA non-coding upstream 286224 33663165 ~ 33664789 (-)
XLOC_002891 BX569785.1 non-coding upstream 499190 33876131 ~ 33880364 (-)
XLOC_002900 NA non-coding upstream 819841 34196782 ~ 34198566 (-)

Expression


Co-expression Network