G1185451


Basic Information

Item Value
gene id G1185451
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 51465343 ~ 51468001 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1351891
TATCGGAATTACAGTATCTGCACCTGTAAGAGTATGTACATCTTATTGACATATAATGCAGATATACAGTCAGAGATGCACAGGCATCACCTCATGCAATAAAACCCTGAAATGATGTATTTATTTGTAGATATACCAATTTGGGCCAACCCAATCCGCCACATTCACCAGACAAGGTAAATAGCGATTTCCTTGAAAATAAAAGTGCCATACAAGCAACCATGGCATGGCAATGCATTTCTGTAGACAATAACTACAGTTTTGTATCATTGTCTACACATACACAATATATCATTTTAGAAATAATACTGATCATAATACTTGCAGAGTATATGTAACGCAGAGTTAGTCCTCTTGGCACTGCAGCTACAGTAGTGTACATGCCCAGCATGGGAGTTGCTGGTTTCATACCAGACAGAACCAACAACCCCCTGATTTCTATACAATATAGTAGACCTCAAAATATcaagaaatgaaaaaaataaaatgtgcatTCGCTAGTTTCCCATTTTTTACTTCTTGATACAATCTACGCCCGCATCGATGTCTGTTATGAAGACGACGATTAGATAGTGAATATTATTACTTAGAATAAAAAGGCAGGTAGGGGGTGGTAGCAGCTATATTCAAAACATATATCCAGCAAATATTTTATATGTTTGTAGAGGAAGTAAATATAATATAGATTCAGGAAGATAAGTAAACACAAACTTGTGAACGGAGCAGCAGCCTTAATCACTGCAAGAGCTCCAGAGAACATTAACAATGACAGACTATCTGTCATTAAGCAATTATAACTCATGCAATAAAAACAGAGTGAAGGCTAATTTTACTTAATGGCTGTTCGTAAAGtgcagagagagaacaaatggaTGTTACTGAACAGGAATGACTGTCGACGAGTCAGTGAACGGAAAGGGTTTTCCACCAGTAGCCTTtataaatggcatatattatcaTATTATAAAGAAGAGGGTTAGACTGTACAGTTGTGTAAAGGGTGTTAATAAGTATAATTATTATGAAAGACAGAGCAGTCTAAAGAGCAGTCTAAAGACATAAAATACAGTTTGAgtctgttttttaaaatatacTAGCATGCACTAATCATGCTCTACGATGACATTCTGCAAATTCAAGGCATCCCAACACTAAGAAGCATTCAAGCAAGCATTCAAAGTATTTTGAAAGAAAATATGATCTTAAAATACTCCATGAAGCAAGCATTCACAACCATAGCTTGCAATGTTaacaatgtatatatttttttacaatattaCATTTGTTTACTATGGAGGTTACGCTCAGTTCATTTCTTATCTACAATACAGGAGTTGCTTTCAGTACTTTTCAATTAAATGCATCACTCATCTGTCTACAGTTATCTCTTAATAACTTCTCTCATCTACCCTTTTCCCCTTTCTATTTCATTTCAAGGAACTACTATCTAAAACTCCTCCCTTTCACGCATTTCCCATCCTGTTAAAAAGTGATAAAAGTCTGGCCAAAGAGCCAGCAAGGATATAAAGGCTTAGGAAATATATTTAAAATTGAATCACCAGTTAGTTAGGCAAATAGATGGCTTTCAATAGTCATGATGGACATGACGGTGGAAATCTCATCAGGGAAAGCAAGTCATTGGTTTCCAAATGACAAATAACACGTGTGACATATGAATCAATATGAATCTATGCCAGCAGCAATGTCTGATAGAATCTATGTAATGGTCTTTGCTCATCAGTATGTAACAACACTTAAGCAGCTTATTCAATTTACTGCTCTAATTTAAACCTATTGACATCCATCAGAGAGACCATTACTGTATCCCAATACAACGAGGGCAGAGTATGGGTAGAATGTTTTTATTAATCACATAACTTACCATAGAATTAAAGGTAACTACTTTCTCATTCTAAACCTAAATTAAACTACAGTAAAAGTTAATTGTACCTGGGCTATGaaattataatgatgatgatgtgcaTTTCATGGAATTACATGTAGAATCCCATAAAACTGGTTACTATTCATATAATTCTAGAACCAATTAAGATCTCTGTGGAGCATTCATCCAGCCTATACAGTAATTGGTTTCCCCAATGTTTGCATTAGGGTGTCATGGAAAGGTTTGCGGCACTGTCAGATACCTTCTGGACAATTCATCCTGCTGCTTTCAGTATACGCTATTATGAGGTCCACACTATAGTGAGGAGTTAGTTAGGAAACAAACTACTGTAGTGCAAAACCtactaaataaatacacaacacaATGGTGTCATAGAGGACAAACATACTTTCTTAATATCCACAACAAATCTGGGTTGGCCAAGCCTCAAACTGAGCCCATTCCTTCAGGTCTGATCTTTATCTAACTACCACACATGATGCAGGAGCCATTCTACACAGAACATGGACTAAGCATGCACTCCAGACTGGGAGATAACCAACAGCACATTCACTTCCACCAAGAGCATGGAATTCCTGATTATGACACAAATGTATTTACTTAGGCAAGaccattaagaacaaattctcatttacaatgacggcctaccccggccaaacccggatgacgctgggccaattgtgcgccgcccaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1351891 True 2600 lncRNA 0.37 2 51465343 51468001

Neighbor

gene id symbol gene type direction distance location
LOC110486737 LOC106606772 coding upstream 60763 51394436 ~ 51404580 (+)
LOC110487554 LOC106601638 coding upstream 71230 51384172 ~ 51394113 (+)
LOC110486735 LOC100380774 coding upstream 91352 51344378 ~ 51373991 (+)
LOC110486733 LOC106606838 coding upstream 472501 50991494 ~ 50992842 (+)
LOC110485209 LOC105013079 coding upstream 500126 50939574 ~ 50965217 (+)
LOC110486745 LOC106601712 coding downstream 94363 51562364 ~ 51566331 (+)
LOC110486751 LOC106606781 coding downstream 118245 51586246 ~ 51590496 (+)
LOC118938087 NA coding downstream 295580 51760793 ~ 51765924 (+)
LOC118938318 LOC106606767 coding downstream 315887 51783888 ~ 51823957 (+)
LOC118938088 NA coding downstream 372451 51840452 ~ 51852886 (+)
G1185366 NA non-coding upstream 151358 51313766 ~ 51313985 (+)
G1185347 NA non-coding upstream 175093 51289810 ~ 51290250 (+)
G1185343 NA non-coding upstream 179109 51285958 ~ 51286234 (+)
G1185342 NA non-coding upstream 179494 51285630 ~ 51285849 (+)
G1185457 NA non-coding downstream 8334 51476335 ~ 51481810 (+)
G1185464 NA non-coding downstream 17058 51485059 ~ 51486576 (+)
G1185466 NA non-coding downstream 21468 51489469 ~ 51489672 (+)
G1185467 NA non-coding downstream 21834 51489835 ~ 51490241 (+)
G1185470 NA non-coding downstream 25300 51493301 ~ 51493516 (+)
G1185436 NA other upstream 18786 51445907 ~ 51446557 (+)
G1184435 LOC106606845 other upstream 478777 50985813 ~ 50986566 (+)
G1183875 NA other upstream 1581908 49882821 ~ 49883435 (+)
G1183819 NA other upstream 1630329 49832221 ~ 49835014 (+)
G1185521 NA other downstream 159681 51627682 ~ 51628676 (+)
G1185527 NA other downstream 183612 51651613 ~ 51653770 (+)
G1185522 NA other downstream 225882 51693883 ~ 51695058 (+)
G1185535 NA other downstream 229875 51697876 ~ 51698646 (+)
G1185616 NA other downstream 249747 51717748 ~ 51718204 (+)

Expression


Co-expression Network