G1185464


Basic Information

Item Value
gene id G1185464
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 51485059 ~ 51486576 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1351904
CATGAACAAGCTTAAATAAAAACACAATTACAATTTAAGCTTTGTCACAAGATTATCCACATGAACTttaaaggacaacttgtcatccaaccaaatacctaggtatttgtaggatgACACTTTTTCAATGGATAAGCCACCAAATGTGACAATGCTAATGTTCTCTGGCAGAGTTCTAGCTCTGGTAAAGGTCATGAATTTAGTTTTTTGTATATTCAAGACCAGTTTGAGACCATAAAGGGAGGCCTGCAGTGGCTGAAAAGCAGTCTGGAGCTCTTCAACATcctgaaccagagaaggagcacatgaatatataactgtatcatctgcattAGATGTAACTTTGCTGGTTGGAACCCTGGGGCACACCTCTATTAATCTCAAGAAAGCTAGACTTGTGATCGTTGGTATATTCACATTGTGTTTTGTCAGAAAGATAGTTCCTAAACCAATTTACTGCCACTTCACTGAGATCAATGTTTCTGAGTCTATCTAGCAACAATTCATGGTCAACTAAATCAAAGGCCTTTAAGAAATCCACAAACAGATCAGCACAATGTGTCTTTTTATCAAGTCCATTAATGATGTAATTTGCCACTGCCATAGCTGCAGTTGTGATGCTGTGTCCTGATCTAAAGCCAGACTGAACACTGCTCAGTATGTTCTTTTCAATGAAGATGTTTTTTAACTGTGAGTTCACTAGGGATTCATAGACTTTGGCCAGGATAGGGAGTTTAGAGATAGGACCATAGTTTTTAGCATCTGAGGGATCTCCACTCGTTAGCAGTGGGAGGACATAAGCTGATTTCCAAATGCCGGGTATGGAATTGGTCAAGAGACTCAAGTTGAAAATGTGAGCCACAGGTTCAGTAATAATACCAGCTGCTATCTTTAAGAGGTAGGGGTCCAAGTTGTCTGGGCCTGCAGACTTTGTAGTGTCTATTGCCTCTAGTGTTTTATAGACCTCAGTATAAGAAACAGGCTCAAAGTTCAAATGGTTCACATGAGGGCCTATGTCATAGTTGACTGTAACAGAGCTTACATTAGAGGCCTGGGCCCCATCGTTATCAAAAACTGAACCAGCAGATATGAAGTGCTTGTTAAAAAACCCAACAATATGGGCTTTATCCTTCACTTAATTAGAATCCATCATTAAATGGTCAGGAAGGCCAGAGGATACATTAGAACCTGACACTGATTTGATTAGCTTCCAGAACTTGGTAGGGTTGTTTAGGTTCTCTGTGACTGCATTTAGATAGTAATATGATTTGGAATTCCTGATCAATCCTGTGAATTTGTTTCTTAGCACTCTGAAGGAGGCCCAGTCAACAGGAGCACTTGTATGTCTAGCTTGAGCCCAAGAGATGTTTCTCTTTCTAATTAATTCTGCCAAGTTATCTGATAACCAGGGACTGTCCCTTCCACTGATTCTAAACTTCTTCCCAGGGGCATGCTTATCACAAATCTACACAAATGTCATATAAAAATAGTCCCAGGCAGTGTCAACATCGGGAAACA

Function

NR:

description
RNA-directed DNA polymerase from mobile element jockey

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1351904 True 1518 lncRNA 0.40 1 51485059 51486576

Neighbor

gene id symbol gene type direction distance location
LOC110486737 LOC106606772 coding upstream 80479 51394436 ~ 51404580 (+)
LOC110487554 LOC106601638 coding upstream 90946 51384172 ~ 51394113 (+)
LOC110486735 LOC100380774 coding upstream 111068 51344378 ~ 51373991 (+)
LOC110486733 LOC106606838 coding upstream 492217 50991494 ~ 50992842 (+)
LOC110485209 LOC105013079 coding upstream 519842 50939574 ~ 50965217 (+)
LOC110486745 LOC106601712 coding downstream 75788 51562364 ~ 51566331 (+)
LOC110486751 LOC106606781 coding downstream 99670 51586246 ~ 51590496 (+)
LOC118938087 NA coding downstream 277005 51760793 ~ 51765924 (+)
LOC118938318 LOC106606767 coding downstream 297312 51783888 ~ 51823957 (+)
LOC118938088 NA coding downstream 353876 51840452 ~ 51852886 (+)
G1185457 NA non-coding upstream 3249 51476335 ~ 51481810 (+)
G1185435 NA non-coding upstream 13229 51442917 ~ 51471830 (+)
G1185451 NA non-coding upstream 17058 51465343 ~ 51468001 (+)
G1185366 NA non-coding upstream 171074 51313766 ~ 51313985 (+)
G1185466 NA non-coding downstream 2893 51489469 ~ 51489672 (+)
G1185467 NA non-coding downstream 3259 51489835 ~ 51490241 (+)
G1185470 NA non-coding downstream 6725 51493301 ~ 51493516 (+)
G1185486 NA non-coding downstream 32752 51519328 ~ 51519548 (+)
G1185487 NA non-coding downstream 33253 51519829 ~ 51520150 (+)
G1185436 NA other upstream 38502 51445907 ~ 51446557 (+)
G1184435 LOC106606845 other upstream 498493 50985813 ~ 50986566 (+)
G1183875 NA other upstream 1601624 49882821 ~ 49883435 (+)
G1183819 NA other upstream 1650045 49832221 ~ 49835014 (+)
G1185521 NA other downstream 141106 51627682 ~ 51628676 (+)
G1185527 NA other downstream 165037 51651613 ~ 51653770 (+)
G1185522 NA other downstream 207307 51693883 ~ 51695058 (+)
G1185535 NA other downstream 211300 51697876 ~ 51698646 (+)
G1185616 NA other downstream 231172 51717748 ~ 51718204 (+)

Expression


Co-expression Network