XLOC_030945 (poli)


Basic Information

Item Value
gene id XLOC_030945
gene name poli
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 18912950 ~ 18924834 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00060153
AATGTCAGCAAATGCTGCACATGCATGCTGGTTATGTTTTGATTGGTGTGTCGACATGTTTTGCTGTTGTTGATTTAcagtaatgttttatttagtttggtATTGTCATTCACAACTGTTCATTTCGTTGTTGTAAAGATGGACTCGGACGAAGAGGAAGACAATAATGACTGGGAACGCAGTTTAGAGTCAGACATTTTGGAGACTGAAGGAAGTTCCACTGATAGAGTTTCATTGACATCCCAGAGAGTGATCCTGCATTTTGACCTGGACTGTTTTTATGCACAAGTTGAGATGATCCGAAATCCAGCTCTCCGGACCAAACCTCTTGGGATACAGcagaaatatattattgtaacCAGTAATTATGTGGCAAGAGAGCTTGGCGTGAACAAGCTGATGTCAGTGACAGATGCAGTGGAGAAATGTCCACAGCTGGTGCTTGTAAAAGGAGAAGATCTCACTCATTACAGAGAAATGTCCTACAAAGTCACTGAATTGCTGATGTCGTACTGCCCTCTAGTGGAGCGGCTGGGCTTTGATGAGAACTTCATGGACGTTACAGAAATGGTGGAGAAACGAATAAAGGAGACCCGTATTTCAGATCTCTCCTTCAATGGACACGTATACAATCATGAAAGTGTTGTGGTTGATGAGGAGAACATTCGTTTGGCTGTCGGCTCTGTGATTGCCGCTGAGATGAGGCAAGCCATCTTCAGCACACTGGGGCTAACTGGCTGTGCTGGTGTCGCTAGCAACAAACTATTAGCCAAGCTGGTGTCAGGCAGCTTTAAACCCAACCAGCAGACCACCCTCCTGCCTCACAGCACCGCTGAACTCATGAGCAGCCTTACAGGACTCATCAAAGTGCCAGGGATTGGTTACAAGACACGTGAGAAGCTGAAGGCTCTGGGTTTGGTTAATGTGAGAGATCTACAGTTGTACCCTTTGTCCGATCTGGTGAAAGAGTTTGGAGAGATGAACGCTAAGAGGATCCAAAACCTCGCCTGTGGGATTGATGATTCTCCAGTGACTCCAGCGGGTCCTCCTCAGtcCCTCAGCGATGAGGACTCATTCAAGAAAATGTCCACTCTAGAGGAAGTTCTAAAGAAAATTGAAGAACTGCTCATCAACCTTACTGAGAGGATGCACAAAGATGGCAGGCAGCCACACACACTGAGACTAACGATTCGCAAATACACTGTCACCAATCGCTGGTTTAATCGAGAGAGTCGTCAGTGTCCCATTCCCAACCACACCGGGCTCAAGATCACAGGAGGAAGCAGCGAGGCTGTGCCCCAGTTACTGTCACTGTCGATGAAGCTCTTTCATAAAATGGTGGACCCACATCAGCCTTTTCATCTGACTCTGCTCAATGTGTGTTTTAGCAACCTGCAGGCTAAAAGCTCCAGCAAAAGCTCCATCGCTTCTTTTTTTACACACAAATCTCCTTCAACAACACAAATCCCATCTCAGCAGGTGGACTCTGATCTCTGTGAATCTGTTGCAACTTCCCATTTCACTCAAGCAGatgttttgcataaaaatgataAAGCGTGGAAACCAGTAAAAAACACATCAATATCTCCAACCCAAACACAGTCGACCTCAGTCAACCCCAAATCTTCCCTATCTCCCAGACAGCCTGTTTCAGAGCACTCACAACATGCAAACATAAACATCAGACCGCCTTGTTTGAGCAGCGCTCccaaaaaaacattgcatttcaAGCTGCCTCCTAATGTTGATGCGGATGTATTCAAACTCCTTCCTGAACACATTCAGATGGAGCTGATGTCCAGTTTTAAAAAGGGAGACTCCGTTTACAGACCCGCTGACACAGAAGATGTTGACCCAGAACATCAACCCACGTTTGCCTCTCGCCAACCAAAAACACCAAAACCTTGTGAGTCTGCAGTAAATGTCTGCACAAATTCTGCTTCTAATCCCCATGAACTCAGCCAGAACTTTTCATCTCCTCAGTCGATCCCGGAGTTCAGTTCTGAACTTGTCATGGTCACAGAAAGTGACGATATCCCACACTCCACTCAGGCCATTCAGCCAGAAGTTCCTGCAAATGTGGACCCTTATGTGTTTTCACAACTTCCTGCTGATGTGCAAAGGGAATTACTGACCGAGTGGAGACAGCAGAGGCCGGTCCTCAAAATCCCTTCAAAACACTCACATAAATCCTCCAATAGCAGAGACAGGAAGACCTCGACTAAAGGCAGCCAGTGTAACAACATACTGAAATACTTCAAACCCAACTAAAGACACAAACACCTTAGTGCTGTTCTATAATACAAAAAGATCCTTTGTAAATAAAGCGATTGTTTTCAGAAAGTTTAAAAa

Function

symbol description
poli Predicted to enable DNA-directed DNA polymerase activity. Predicted to be involved in translesion synthesis. Predicted to act upstream of or within DNA biosynthetic process and DNA repair. Orthologous to human POLI (DNA polymerase iota).

GO:

id name namespace
GO:0019985 translesion synthesis biological_process
GO:0006281 DNA repair biological_process
GO:0003887 DNA-directed DNA polymerase activity molecular_function
GO:0003684 damaged DNA binding molecular_function

KEGG:

id description
ko03460 Fanconi anemia pathway
ko03400 DNA repair and recombination proteins

ZFIN:

id description
ZDB-GENE-050417-376 Predicted to enable DNA-directed DNA polymerase activity. Predicted to be involved in translesion synthesis. Predicted to act upstream of or within DNA biosynthetic process and DNA repair. Orthologous to human POLI (DNA polymerase iota).

Ensembl:

ensembl_id ENSDARG00000029250

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00060153 True 2352 mRNA 0.45 10 18912950 18924834

Neighbor

gene id symbol gene type direction distance location
XLOC_030944 bri3bp coding downstream 1836 18904968 ~ 18911114 (-)
XLOC_030943 aacs coding downstream 15468 18827314 ~ 18897482 (-)
XLOC_030942 NA coding downstream 128516 18783738 ~ 18784434 (-)
XLOC_030941 TMEM132C coding downstream 399000 18431401 ~ 18513950 (-)
XLOC_030940 NA coding downstream 488313 18317903 ~ 18424637 (-)
XLOC_030946 ankle2 coding upstream 18209 18943043 ~ 18962794 (-)
XLOC_030947 golga3 coding upstream 40660 18965494 ~ 19006290 (-)
XLOC_030948 ranbp1 coding upstream 81867 19006701 ~ 19014589 (-)
XLOC_030949 NA coding upstream 83812 19008646 ~ 19008774 (-)
XLOC_030950 fam214b coding upstream 96952 19021786 ~ 19052497 (-)
XLOC_030939 NA non-coding downstream 623374 18288810 ~ 18289576 (-)
XLOC_030934 CR759970.1 non-coding downstream 1871662 17040621 ~ 17041288 (-)
XLOC_030933 CR392021.1 non-coding downstream 2013903 16898923 ~ 16899047 (-)
XLOC_030951 NA non-coding upstream 387941 19312775 ~ 19315648 (-)
XLOC_030952 NA non-coding upstream 409372 19334206 ~ 19336527 (-)
XLOC_030959 NA non-coding upstream 1035846 19960680 ~ 19963556 (-)
XLOC_030961 NA non-coding upstream 1180174 20105008 ~ 20109265 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000071_01436960_01442221 POLI coding CI01000071 null 1436960 ~ 1442520 (+)