XLOC_030951


Basic Information

Item Value
gene id XLOC_030951
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 19312775 ~ 19315648 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00061972
CACGCATGCCGGTAAAACCTTTACTGGTTCTTCCTGCGGTGCAGGCATCAATGGACTCTGCTTCATGAGGGGAGCTGGAGGTGGTGTTGGAGGCAATGGAGCAAGTTTAGGAGTCTCTGTATGTATGGCCACTCCAGGTGGGGTGTGCTGAGGCAGAAGACCTGCAGAGATGGGGCAAGAGAGGGAACGTGGTGGCCGTGGACCATTCAGAGTCGGAGAGCATGTTGAGCAATTTCCAGAAGAGGTAGGTGCACCCTGGAGCCGAATTGGGGAATAGCTTCCCAGTGGAGATGGCCGCactgttgtaggtgtgttggagGTGCCGTGAGCTGGCCTGTGGTGTTCTTCAGAGTCATCTTCATCACCCTCTGGTGCTGCAGCCCCTCGACTCTGCATTTGGCTTATGTATCCGTCCAGAAGAGGAAGGATAGGCTTTGCCTGGGGTTTCCCAAACTGGTGCTGAAAAGTGAAGGGCTGGATAGGTAAAGAGGTTGGGCGTTGATCTTTGCTATAGCGAATTACAGTTGGAGAGGAGAGATAGG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00061972 True 542 lncRNA 0.54 3 19312775 19315648

Neighbor

gene id symbol gene type direction distance location
XLOC_030950 fam214b coding downstream 260278 19021786 ~ 19052497 (-)
XLOC_030948 ranbp1 coding downstream 298186 19006701 ~ 19014589 (-)
XLOC_030949 NA coding downstream 304001 19008646 ~ 19008774 (-)
XLOC_030947 golga3 coding downstream 306485 18965494 ~ 19006290 (-)
XLOC_030946 ankle2 coding downstream 349981 18943043 ~ 18962794 (-)
XLOC_030952 NA coding upstream 18558 19334206 ~ 19336527 (-)
XLOC_030953 foxn4 coding upstream 69855 19385503 ~ 19400166 (-)
XLOC_030954 kctd10 coding upstream 120835 19436483 ~ 19444949 (-)
XLOC_030955 mmab coding upstream 173933 19489581 ~ 19494048 (-)
XLOC_030956 trpv4 coding upstream 480329 19795977 ~ 19833310 (-)
XLOC_030942 NA non-coding downstream 528341 18783738 ~ 18784434 (-)
XLOC_030940 NA non-coding downstream 888138 18317903 ~ 18424637 (-)
XLOC_030939 NA non-coding downstream 1023199 18288810 ~ 18289576 (-)
XLOC_030934 CR759970.1 non-coding downstream 2271487 17040621 ~ 17041288 (-)
XLOC_030959 NA non-coding upstream 645032 19960680 ~ 19963556 (-)
XLOC_030961 NA non-coding upstream 789360 20105008 ~ 20109265 (-)
XLOC_030967 NA non-coding upstream 973711 20289359 ~ 20297439 (-)
XLOC_030968 AL845326.1 non-coding upstream 1093188 20408836 ~ 20408952 (-)

Expression


Co-expression Network