XLOC_030970 (ISCU)


Basic Information

Item Value
gene id XLOC_030970
gene name ISCU
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 20443888 ~ 20446082 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00060187
GGTTGAGCACCGTGCATGCAGTAATAGTCAGTCAGTCATCATGGCGTTAGCAGCAGCTGCCAGGCGCTGTGCATCTTCTGCACTTTTCAGTAAATCATTGTCATTACCAGAGCTCAGACCCGCCTGCTCTTATCATAAAAAGGTTGTGGACCACTATGAAAACCCCAGAAATGTTGGTTCCTTGGACAAGAACGCAAAGAACGTGGGAACGGGTTTAGTAGGTGCACCCGCATGTGGGGATGTAATGAAACTACAGATTCAGGTGGATGAGAATGGAAAAATAATAGATGCCAGattcaaaacctttggctgtggCTCTGCCATTGCTTCCAGCTCTCTGGCCACAGAGTGGGTGAAGGGGAAATCGATTGATGAAGCCCTGAAAATCAAAAACACAGAGATTGCCAAAGAACTTTGTCTTCCACCAGTCAAACTGCATTGTTCTATGCTTGCAGAGGATGCAATCAAGGCTGCATTAGCAGACTATAGGCTCAAACAGAAGGATGAGAAGGAGACATTGGCTGAAGCTCGAAATTAATGGTCTTATTTACAGACCGTCACCGTCAACCACTCTATATGTGACTGATGAAAAGTTGTGTGGTTTATTTCCTTACAGAGGTTGTAATAAACAAAATAGCCTGCATCTATTATTACTACTAAACTCGTACTGCCTTACCATTGCTGGTTTGAGGTGGTTTGCATTGACAGACTGTGGAGATCTTTGAATTAAAGTTTTTTTCTCCTGGAATCACgcacattaaaataaactctttaaTTCACGAAGATCTCAGACATTACATGTCATCTATTGTAAATGCATACTTCAACAATGCTTGTACATGTATTCTATTACAGTTTTTCAAAAAGGAAAAGTCGTTTTTCTGCAGGGAAAGTTATATCATTAGGAGTGGTTTGTaagcaaaagcaaaaatatatatatactggttTTTCTGCTGTATTTCTTTTCAAAACGAAATAAAGCTCTGGGTGTTTATGCTGTATCA
>TCONS_00060189
ATACATATTTACGGTTAGATAAATAATGCACTTGTGTAACTGTCCTACAAACTCACTAGAGGTTGTGGACCACTATGAAAACCCCAGAAATGTTGGTTCCTTGGACAAGAACGCAAAGAACGTGGGAACGGGTTTAGTAGGTGCACCCGCATGTGGGGATGTAATGAAACTACAGATTCAGGTGGATGAGAATGGAAAAATAATAGATGCCAGattcaaaacctttggctgtggCTCTGCCATTGCTTCCAGCTCTCTGGCCACAGAGTGGGTGAAGGGGAAATCGATTGATGAAGCCCTGAAAATCAAAAACACAGAGATTGCCAAAGAACTTTGTCTTCCACCAGTCAAACTGCATTGTTCTATGCTTGCAGAGGATGCAATCAAGGCTGCATTAGCAGACTATAGGCTCAAACAGAAGGATGAGAAGGAGACATTGGCTGAAGCTCGAAATTAATGGTCTTATTTACAGACCGTCACCGTCAACCACTCTATATGTGACTGATGAAAAGTTGTGTGGTTTATTTCCTTACAGAGGTTGTAATAAACAAAATAGCCTGCATCTATTATTACTACTAAACTCGT
>TCONS_00060188
ATACATATTTACGGTTAGATAAATAATGCACTTGTGTAACTGTCCTACAAACTCACTAGAGGTGTGTCTTTTAACATCACTCTTCTTGTGCCATAGGTTGTGGACCACTATGAAAACCCCAGAAATGTTGGTTCCTTGGACAAGAACGCAAAGAACGTGGGAACGGGTTTAGTAGGTGCACCCGCATGTGGGGATGTAATGAAACTACAGATTCAGGTGGATGAGAATGGAAAAATAATAGATGCCAGattcaaaacctttggctgtggCTCTGCCATTGCTTCCAGCTCTCTGGCCACAGAGTGGGTGAAGGGGAAATCGATTGATGAAGCCCTGAAAATCAAAAACACAGAGATTGCCAAAGAACTTTGTCTTCCACCAGTCAAACTGCATTGTTCTATGCTTGCAGAGGATGCAATCAAGGCTGCATTAGCAGACTATAGGCTCAAACAGAAGGATGAGAAGGAGACATTGGCTGAAGCTCGAAATTAATGGTCTTATTTACAGACCGTCACCGTCAACCACTCTATATGTGACTGATGAAAAGTTGTGTGGTTTATTTCCTTACAGAGGTTGTAATAAACAAAATAGCCTGCATCTATTATTACTACTAAACTCGT

Function

symbol description
iscu Enables molecular adaptor activity. Involved in negative regulation of iron ion import across plasma membrane; positive regulation of aconitate hydratase activity; and positive regulation of mitochondrial electron transport, NADH to ubiquinone. Located in cytosol and mitochondrion.

GO: NA

KEGG:

id description
ko03029 Mitochondrial biogenesis

Ensembl:

ensembl_id ENSDARG00000035596

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00060187 False 1004 mRNA 0.40 5 20443888 20446082
TCONS_00060189 False 585 processed_transcript 0.42 5 20444226 20445673
TCONS_00060188 True 620 processed_transcript 0.42 5 20444226 20445673

Neighbor

gene id symbol gene type direction distance location
XLOC_030969 NA coding downstream 23517 20416722 ~ 20420371 (-)
XLOC_030968 AL845326.1 coding downstream 34936 20408836 ~ 20408952 (-)
XLOC_030967 NA coding downstream 146449 20289359 ~ 20297439 (-)
XLOC_030966 dao.3 coding downstream 238813 20197138 ~ 20205075 (-)
XLOC_030965 dao.1 coding downstream 248538 20188438 ~ 20195350 (-)
XLOC_030971 ficd coding upstream 39542 20485624 ~ 20491272 (-)
XLOC_030972 NA coding upstream 154305 20600387 ~ 20614620 (-)
XLOC_030973 NA coding upstream 169989 20616071 ~ 20619339 (-)
XLOC_030974 wscd2 coding upstream 181118 20627200 ~ 20678300 (-)
XLOC_030975 si:ch211-225b11.1 coding upstream 340690 20786772 ~ 20814588 (-)
XLOC_030961 NA non-coding downstream 334623 20105008 ~ 20109265 (-)
XLOC_030959 NA non-coding downstream 480332 19960680 ~ 19963556 (-)
XLOC_030981 NA non-coding upstream 793251 21239333 ~ 21242084 (-)
XLOC_030982 BX470224.4 non-coding upstream 847048 21293130 ~ 21293245 (-)
XLOC_030984 NA non-coding upstream 1163276 21609358 ~ 21852227 (-)

Expression


Co-expression Network