Gene
RNA
| Item | Value |
|---|---|
| gene id | G1422201 |
| gene name | sphm |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 14181228 ~ 14182097 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| N-sulphoglucosamine sulphohydrolase-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1627857 | True | 671 | lncRNA | 0.43 | 2 | 14181228 | 14182097 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110485491 | LOC106564342 | coding | downstream | 7499 | 14158383 ~ 14173729 (-) |
| LOC110485476 | LOC106564346 | coding | downstream | 62469 | 14112506 ~ 14118759 (-) |
| LOC118936544 | LOC106591784 | coding | downstream | 78847 | 14060252 ~ 14102381 (-) |
| LOC100136331 | LOC106591788 | coding | downstream | 143945 | 14024955 ~ 14037283 (-) |
| LOC110485459 | LOC106564320 | coding | downstream | 184150 | 13959793 ~ 13997078 (-) |
| gnav1 | LOC106591843 | coding | upstream | 8996 | 14191093 ~ 14229813 (-) |
| LOC118940023 | pcy2 | coding | upstream | 48824 | 14230921 ~ 14247448 (-) |
| LOC110487229 | LOC106591833 | coding | upstream | 88059 | 14270156 ~ 14275195 (-) |
| LOC110485493 | LOC106592221 | coding | upstream | 93765 | 14275862 ~ 14289159 (-) |
| LOC110485498 | LOC106592261 | coding | upstream | 111603 | 14293700 ~ 14343967 (-) |
| G1422230 | LOC106591798 | non-coding | downstream | 34719 | 14145507 ~ 14146509 (-) |
| G1422222 | NA | non-coding | downstream | 40641 | 14123642 ~ 14140587 (-) |
| G1422224 | NA | non-coding | downstream | 43395 | 14137138 ~ 14137833 (-) |
| G1422210 | NA | non-coding | downstream | 74982 | 14106046 ~ 14106246 (-) |
| G1422189 | NA | non-coding | downstream | 109121 | 14071589 ~ 14072107 (-) |
| G1422255 | NA | non-coding | upstream | 66821 | 14248918 ~ 14266303 (-) |
| G1422260 | NA | non-coding | upstream | 70188 | 14252285 ~ 14262233 (-) |
| G1422257 | NA | non-coding | upstream | 84742 | 14266839 ~ 14267421 (-) |
| G1422266 | NA | non-coding | upstream | 86588 | 14268685 ~ 14268959 (-) |
| G1422265 | NA | non-coding | upstream | 87351 | 14269448 ~ 14270063 (-) |
| LOC118940029 | exosc1 | other | downstream | 312557 | 13863439 ~ 13868827 (-) |
| G1422125 | LOC106595916 | other | downstream | 322978 | 13856876 ~ 13858250 (-) |
| LOC118940035 | NA | other | downstream | 400188 | 13772139 ~ 13781710 (-) |
| LOC110485508 | LOC106564355 | other | downstream | 546227 | 13628154 ~ 13644563 (-) |
| G1422757 | NA | other | upstream | 409369 | 14591466 ~ 14592594 (-) |
| G1422796 | NA | other | upstream | 583434 | 14765531 ~ 14768638 (-) |
| G1422891 | LOC106601621 | other | upstream | 744268 | 14907317 ~ 15353090 (-) |
