G1422255


Basic Information

Item Value
gene id G1422255
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 14248918 ~ 14266303 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1627934
acctcaccactataccaactaaccttatacccattaaaacctcaccactataccaactaaccttatacccattaaaacctcaccactataccatCTAACCTtatacccattaaaacctcaccactataccatCTAACCTtatacccattaaaacctcaccactataccaactaaccttatacccattaaaacctcaccactataccatCTAACcttatacccattaaaacctcaccactataccaactaaccctacacccattaaaacctcaccactataccaactaaccctacacccattaaaacctcaccactataccaactaaccttatacccattaaaacctcaccactataccaactaaccctacacccattaaaacctcaccactataccaactaaccctacacccattaaaacctcaccactataccaa
>TU1627933
acctcaccactataccaactaaccttatacccattaaaacctcaccactataccaactaaccttatacccattaaaacctcaccactataccatCTAACcttatacccattaaaacctcaccactataccaactaaccctacacccattaaaacctcaccactataccaactaaccctacacccattaaaacctcaccactataccaactaaccttatacccattaaaacctcaccactataccaactaaccttatacccattaaaacctcaccactataccaactaaccctacacccattaaaacctcaccactataccaactaaccctacacccattaaaacctcaccactataccaactaaccctacacccattaaaacctcaccactataccaactaaccctaaacccattaaaacctcaccactgtTCCACTCCAGCACCAGTCTGTTTGTTTCCCCC
>TU1627931
acctcaccactataccaactaaccttatacccattaaaacctcaccactataccaactaaccttatacccattaaaacctcaccactataccatCTAACCTtatacccattaaaacctcaccactataccatCTAACcttatacccattaaaacctcaccactataccatCTAACCTtatacccattaaaacctcaccactataccaactaaccttatacccattaaaacctcaccactataccaactaaccttatacccattaaaa
>TU1627932
acctcaccactataccaactaaccttatacccattaaaacctcaccactataccaactaaccttatacccattaaaacctcaccactataccatCTAACCTtatacccattaaaacctcaccactataccaactaaccttatacccattaaaacctcaccactataccatCTAACCTtatacccattaaaacctcaccactataccaactaaccttatacccattaaaacctcaccactataccaactaaccttatacccattaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1627934 False 436 lncRNA 0.39 3 14248918 14266303
TU1627933 False 463 lncRNA 0.41 2 14265385 14266303
TU1627931 False 267 lncRNA 0.37 2 14265999 14266303
TU1627932 True 267 lncRNA 0.37 2 14265999 14266303

Neighbor

gene id symbol gene type direction distance location
LOC118940023 pcy2 coding downstream 1470 14230921 ~ 14247448 (-)
gnav1 LOC106591843 coding downstream 19105 14191093 ~ 14229813 (-)
LOC110485491 LOC106564342 coding downstream 75189 14158383 ~ 14173729 (-)
LOC110485476 LOC106564346 coding downstream 130159 14112506 ~ 14118759 (-)
LOC118936544 LOC106591784 coding downstream 146537 14060252 ~ 14102381 (-)
LOC110487229 LOC106591833 coding upstream 3853 14270156 ~ 14275195 (-)
LOC110485493 LOC106592221 coding upstream 9559 14275862 ~ 14289159 (-)
LOC110485498 LOC106592261 coding upstream 27397 14293700 ~ 14343967 (-)
LOC110495053 LOC106564349 coding upstream 81056 14323005 ~ 14371087 (-)
LOC110493419 LOC106564347 coding upstream 112986 14379289 ~ 14382571 (-)
G1422201 sphm non-coding downstream 66821 14181228 ~ 14182097 (-)
G1422230 LOC106591798 non-coding downstream 102409 14145507 ~ 14146509 (-)
G1422222 NA non-coding downstream 108331 14123642 ~ 14140587 (-)
G1422224 NA non-coding downstream 111085 14137138 ~ 14137833 (-)
G1422210 NA non-coding downstream 142672 14106046 ~ 14106246 (-)
G1422257 NA non-coding upstream 536 14266839 ~ 14267421 (-)
G1422266 NA non-coding upstream 2382 14268685 ~ 14268959 (-)
G1422265 NA non-coding upstream 3145 14269448 ~ 14270063 (-)
G1422275 NA non-coding upstream 9117 14275420 ~ 14275693 (-)
LOC110485459 LOC106564320 other downstream 283581 13959793 ~ 13997078 (-)
LOC118940029 exosc1 other downstream 380247 13863439 ~ 13868827 (-)
G1422125 LOC106595916 other downstream 390668 13856876 ~ 13858250 (-)
LOC118940035 NA other downstream 467878 13772139 ~ 13781710 (-)
LOC110485508 LOC106564355 other downstream 613917 13628154 ~ 13644563 (-)
G1422757 NA other upstream 325163 14591466 ~ 14592594 (-)
G1422796 NA other upstream 499228 14765531 ~ 14768638 (-)
G1422891 LOC106601621 other upstream 660062 14907317 ~ 15353090 (-)

Expression


Co-expression Network