G1422971


Basic Information

Item Value
gene id G1422971
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 15137644 ~ 15138571 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1628926
GTAAACAAATCATAAAAATGCTGCTGTAATTCAGAATCCACTTtgtccagagcagctgtgtgATGCACAAAAATGCCAGTTTATGGAAGTCACTTCACTTGAATGTCAGAGGTAACAGAGTTAActtctagctggctagctagctttcGGTATCACTGAACAACGTCTGCTTCATGTAGCTAACAAGCCAGATGAGAGAGCTAGTTCACTGAATTCATACGCCAGTCCAACGTCATCTCTTAATAACACAGTATCTTTACATGGTTGGTTTATTCTGTCTACATTTCTTTACATTTTCAAATGTTATTTGACAATTTATTTGGTGTATTTTCATTTGTATCTTTATGCTGCCATCTTTTGTTTGAATCCTCCCCTGACTCCGCCCACTTCTTCCCCGAAGTAGACCTGACTCCGCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1628926 True 417 lncRNA 0.40 2 15137644 15138571

Neighbor

gene id symbol gene type direction distance location
LOC118940091 LOC106591560 coding downstream 6210 15081145 ~ 15131434 (-)
LOC118940321 LOC106598058 coding downstream 24771 15101681 ~ 15112873 (-)
LOC118940328 NA coding downstream 37971 15098533 ~ 15099673 (-)
LOC118940324 LOC106605911 coding downstream 53858 15079435 ~ 15083786 (-)
LOC118940320 LOC106605908 coding downstream 72162 15003526 ~ 15247342 (-)
LOC118940325 LOC106598058 coding upstream 1155 15139726 ~ 15141814 (-)
LOC118940326 LOC106591409 coding upstream 38370 15176941 ~ 15179247 (-)
LOC118940092 LOC106564328 coding upstream 149840 15288411 ~ 15438405 (-)
LOC118940323 LOC106601626 coding upstream 179180 15317751 ~ 15347285 (-)
LOC118940327 NA coding upstream 234790 15373361 ~ 15375117 (-)
G1422964 NA non-coding downstream 2292 15111905 ~ 15135352 (-)
G1422960 NA non-coding downstream 3994 15086082 ~ 15133650 (-)
G1422967 NA non-coding downstream 16271 15120984 ~ 15121373 (-)
G1422942 NA non-coding downstream 38400 14989392 ~ 15099244 (-)
G1422983 NA non-coding upstream 54378 15192949 ~ 15193628 (-)
G1422903 NA non-coding upstream 72483 15211054 ~ 15275215 (-)
LOC118940319 LOC106564328 non-coding upstream 76590 15132799 ~ 15237418 (-)
G1422993 NA non-coding upstream 94081 15232652 ~ 15233688 (-)
G1422999 NA non-coding upstream 113216 15251787 ~ 15310566 (-)
G1422796 NA other downstream 369006 14765531 ~ 14768638 (-)
G1422757 NA other downstream 545050 14591466 ~ 14592594 (-)
LOC110485498 LOC106592261 other downstream 793806 14293700 ~ 14343967 (-)
LOC110485493 LOC106592221 other downstream 848631 14275862 ~ 14289159 (-)
LOC110485459 LOC106564320 other downstream 1172307 13959793 ~ 13997078 (-)
G1422897 NA other upstream 195307 15333878 ~ 15334891 (-)
G1422918 NA other upstream 244548 15383119 ~ 15405174 (-)
G1422920 LOC106591235 other upstream 258719 15397290 ~ 15413597 (-)
G1423112 NA other upstream 445124 15583695 ~ 15584093 (-)
G1423836 NA other upstream 670115 15808686 ~ 15831010 (-)

Expression


Co-expression Network