G1463887


Basic Information

Item Value
gene id G1463887
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 53890285 ~ 53890839 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1674552
ACTCTGGTGTAAGCACCGGAAATAAATTCACCAACTAAAGTTGAATAACTTCACTCAAATAACACAGATAACTGGGGCATTTGCTAGCAATAAGGGCAGTATTTACTGTAAGGTTGTGTGTACACTTATTACCAtgaaattacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtattttttttgtgaagaatcaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccctttgctttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagcgcagagagcatcatgaagaacaaggaacacaccagg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1674552 True 555 lncRNA 0.39 1 53890285 53890839

Neighbor

gene id symbol gene type direction distance location
LOC110493210 LOC106565341 coding upstream 29149 53794018 ~ 53861136 (+)
si:dkey-7k24.5 LOC106565339 coding upstream 193797 53686160 ~ 53696488 (+)
LOC110494086 LOC106565337 coding upstream 212120 53670309 ~ 53678165 (+)
pb1 pb1 coding upstream 265074 53620749 ~ 53625211 (+)
LOC110494083 LOC106565334 coding upstream 347331 53531256 ~ 53542954 (+)
LOC110494090 LOC106565498 coding downstream 78658 53969497 ~ 53977112 (+)
LOC110493211 LOC106565499 coding downstream 138185 54029024 ~ 54043837 (+)
LOC110494093 LOC106565344 coding downstream 162144 54052983 ~ 54090080 (+)
LOC110494094 LOC106565344 coding downstream 233586 54124425 ~ 54165315 (+)
LOC110494095 LOC106565345 coding downstream 282282 54173121 ~ 54198904 (+)
G1463872 NA non-coding upstream 10922 53879164 ~ 53879363 (+)
G1463871 NA non-coding upstream 11377 53878636 ~ 53878908 (+)
G1463865 NA non-coding upstream 16549 53873421 ~ 53873736 (+)
G1463864 NA non-coding upstream 17065 53872906 ~ 53873220 (+)
G1463860 NA non-coding upstream 19885 53870031 ~ 53870400 (+)
G1463899 NA non-coding downstream 6151 53896990 ~ 53897266 (+)
G1463949 NA non-coding downstream 50489 53941328 ~ 53941530 (+)
G1463968 NA non-coding downstream 76737 53967576 ~ 53968890 (+)
G1464065 NA non-coding downstream 126316 54017155 ~ 54017811 (+)
G1464092 LOC106565344 non-coding downstream 256200 54147039 ~ 54189617 (+)
G1460249 LOC106565103 other upstream 2799396 51080132 ~ 51137770 (+)
LOC110494047 btg2 other upstream 2992841 50894903 ~ 50897444 (+)
G1459769 NA other upstream 3113213 50776529 ~ 50777072 (+)
atxn7l2a LOC106565127 other upstream 3454579 50427145 ~ 50437612 (+)
LOC110494957 qrich1 other upstream 3706589 50181045 ~ 50192699 (+)
LOC110494100 LOC106565348 other downstream 365542 54256327 ~ 54264616 (+)
LOC110494110 LOC106565356 other downstream 580866 54471705 ~ 54474472 (+)
G1466124 NA other downstream 2105809 55996648 ~ 55998347 (+)
G1466131 NA other downstream 2124738 56015577 ~ 56016613 (+)

Expression


Co-expression Network