Gene
RNA
| Item | Value |
|---|---|
| gene id | G1463871 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 53878636 ~ 53878908 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1674536 | True | 273 | lncRNA | 0.35 | 1 | 53878636 | 53878908 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110493210 | LOC106565341 | coding | upstream | 17500 | 53794018 ~ 53861136 (+) |
| si:dkey-7k24.5 | LOC106565339 | coding | upstream | 182148 | 53686160 ~ 53696488 (+) |
| LOC110494086 | LOC106565337 | coding | upstream | 200471 | 53670309 ~ 53678165 (+) |
| pb1 | pb1 | coding | upstream | 253425 | 53620749 ~ 53625211 (+) |
| LOC110494083 | LOC106565334 | coding | upstream | 335682 | 53531256 ~ 53542954 (+) |
| LOC110494090 | LOC106565498 | coding | downstream | 90589 | 53969497 ~ 53977112 (+) |
| LOC110493211 | LOC106565499 | coding | downstream | 150116 | 54029024 ~ 54043837 (+) |
| LOC110494093 | LOC106565344 | coding | downstream | 174075 | 54052983 ~ 54090080 (+) |
| LOC110494094 | LOC106565344 | coding | downstream | 245517 | 54124425 ~ 54165315 (+) |
| LOC110494095 | LOC106565345 | coding | downstream | 294213 | 54173121 ~ 54198904 (+) |
| G1463865 | NA | non-coding | upstream | 4900 | 53873421 ~ 53873736 (+) |
| G1463864 | NA | non-coding | upstream | 5416 | 53872906 ~ 53873220 (+) |
| G1463860 | NA | non-coding | upstream | 8236 | 53870031 ~ 53870400 (+) |
| G1462930 | NA | non-coding | upstream | 332916 | 53543251 ~ 53545720 (+) |
| G1462923 | NA | non-coding | upstream | 347950 | 53530435 ~ 53530686 (+) |
| G1463872 | NA | non-coding | downstream | 256 | 53879164 ~ 53879363 (+) |
| G1463887 | NA | non-coding | downstream | 11377 | 53890285 ~ 53890839 (+) |
| G1463899 | NA | non-coding | downstream | 18082 | 53896990 ~ 53897266 (+) |
| G1463949 | NA | non-coding | downstream | 62420 | 53941328 ~ 53941530 (+) |
| G1463968 | NA | non-coding | downstream | 88668 | 53967576 ~ 53968890 (+) |
| G1460249 | LOC106565103 | other | upstream | 2787747 | 51080132 ~ 51137770 (+) |
| LOC110494047 | btg2 | other | upstream | 2981192 | 50894903 ~ 50897444 (+) |
| G1459769 | NA | other | upstream | 3101564 | 50776529 ~ 50777072 (+) |
| atxn7l2a | LOC106565127 | other | upstream | 3442930 | 50427145 ~ 50437612 (+) |
| LOC110494957 | qrich1 | other | upstream | 3694940 | 50181045 ~ 50192699 (+) |
| G1464092 | LOC106565344 | other | downstream | 295106 | 54147039 ~ 54189617 (+) |
| LOC110494100 | LOC106565348 | other | downstream | 377473 | 54256327 ~ 54264616 (+) |
| LOC110494110 | LOC106565356 | other | downstream | 592797 | 54471705 ~ 54474472 (+) |
| G1466124 | NA | other | downstream | 2117740 | 55996648 ~ 55998347 (+) |
| G1466131 | NA | other | downstream | 2136669 | 56015577 ~ 56016613 (+) |
