XLOC_033930 (mtch2)


Basic Information

Item Value
gene id XLOC_033930
gene name mtch2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 38667066 ~ 38678090 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00066374
GTAGGTTTCATGCTGGATCTGGCAACACGGTTTTTCGCGTATTACCATCGGCAGTTCTCTGTCAAGGAGGGGGACGTTTCGGATCGTCTTGGTAATGGCGGACACATGTGGCCAAGTCCTCCTTGGGTCTGGATTAACAGTCCTTTCCCACCCGCTTATGTACATCAAGGTTTTAGTTCAGGTCGGACATGAACCTCTCGCTCCCACCCTAGGACGGAATATGTTTGGCCGACAAGTCTACCAACTTCCAGGGCTTTTTGCATATGccaaACACATTATCAAGATTGATGGAAAAGCAGGTCTGTTTAAGGGTCTCGCCCCAAGGCTTTGTGCTGGGACCATTGGCACCATTGTCCACAGTAAAGCCTTGCAGAAGTGCCAGGAGGAAAAAATTGAGGTGTTGGGAAGCAGTCTGAAATCAGACGAAGGGTCTCTGCAACAAGTAATAAATGAGACCACTAAAGAAATGATTGCTCGCTCATGTGCTACAGTTGTCACACACCCTTTTCatgTGATCACGCTCAGATGTATGGTCCAGTTTATTGGCAGAGAAGCCAAATACAGTGGTGTTTTTGACTCCATAGTTACCATATACAGAGAGGAGGGAATCCTGGGATTTTTTGCTGGCCTCATTCCTCGTCTACTGGGAGACGTTCTTTCCCTGTGGATCTGCAACATGCTTGCTCACTtcataaacacatacactatagatGAGTCGACGAGTCATACAGGAGAGATCAAGAACTGCTCTCAGGCTGTGACTGGGTTTTTCGCAAGTATGCTGACGTATCCATTTGTATTGGTGTCCAatatgatggcagtaaataattgTGGGCTGGCTGGAGGTCTGCCACCTTATGCTGCCATTTATCCCAACTGGCTGCACTGCTGGAGTCACCTGAGCCGAGAGGGCAACATGAGTAGAGGCAACAGCCTGTTCTTCAGAAAGCTGCCCGCTGGGAAGACCTATGCCATCGAGCAGAAGAGAtttttttgaatggggaaagCCATGAGCATAGTCTATAattctgataatataattgagCTGGCCCACAATGTTGGACTCCTAACCCTTCTTATGCACTTGTTTAAGATGACAACCGTTTTTTGATAATCAGTTTCCAGCATCAGCCTCCAGGATTATTACTGTTAATTTTATCAGTACATTTTCACTACATTGTTGTTTGCTTTGATTTCGGAacatgaagagctttattttAATACCCAGGGATTTGTATACATGACCAAGGAAAATAAAAACCGCAGTATAACTTCAGCAGAGCACCCGAGGGCGCTCTAGACCATCTGTGCCTGAATCCAGTACAGGCCCCTTACATCtccttttgttttgttgcttggtAATGCTCGTcagtaaaacagtaattattatACATCTGTAGTTGTTTCTACTGGTTCAtgcactgactgactgacaaaaACCTGAAGTTCTCTGCCCTGTTAATAGTAAAAtgatttgtgcgtgtgtgtgtgttaatgtgagagGAAGATTGTGCAGCACCTTGAGCCACTGTATTGTCTATCTGATGTCTGCCAGATGTGTTTTGCGTAAGTCTGCTAAGCTTGACCCCACCCTGGTTGTTTTGATGGATAAGATACTATGTGGCTTCATATCAGTGAGTGATTTAGGACAGTGTGTGGTGTGGTTGTCAACTTCTACACACAATTTTCATCAGAGCTCTGGTCTAGTCAGAATAAAGTTGAGATTTTTATTTCCAATGATGTTATAATTGACCCAAATAAATGTGAGAATGCTT
>TCONS_00066375
CGTCTTGGTAATGGCGGACACATGTGGCCAAGTCCTCCTTGGGTCTGGATTAACAGTCCTTTCCCACCCGCTTATGTACATCAAGGTTTTAGTTCAGGTCGGACATGAACCTCTCGCTCCCACCCTAGGACGGAATATGTTTGGCCGACAAGTCTACCAACTTCCAGGGCTTTTTGCATATGccaaACACATTATCAAGATTGATGGAAAAGCAGGTCTGTTTAAGGGTCTCGCCCCAAGGCTTTGTGCTGGGACCATTGGCACCATTGTCCACAGTAAAGCCTTGCAGAAGTGCCAGGAGGAAAAAATTGAGGTGTTGGGAAGCAGTCTGAAATCAGACGAAGGGTCTCTGCAACAAGTAATAAATGAGACCACTAAAGAAATGATTGCTCGCTCATGTGCTACAGTTGTCACACACCCTTTTCatgTGATCACGCTCAGATGTATGGTCCAGTTTATTGGCAGAGAAGCCAAATACAGGTCAGTggtttaattttaatagttttttattttctttcatatttattaatgtttgtttttgttctgtccAGTGGTGTTTTTGACTCCATAGTTACCATATACAGAGAGGAGGGAATCCTGGGATTTTTTGCTGGCCTCATTCCTCGTCTACTGGGAGACGTTCTTTCCCTGTGGATCTGCAACATGCTTGCTCACTtcataaacacatacactatagatGAGTCGACGAGTCATACAGGAGAGATCAAGAACTGCTCTCAGGCTGTGACTGGGTTTTTCGCAAGTATGCTGACGTATCCATTTGTATTGGTGTCCAatatgatggcagtaaataa

Function

symbol description
mtch2 Acts upstream of or within digestive tract development; fat cell differentiation; and liver development. Predicted to be integral component of membrane. Predicted to be active in membrane and mitochondrion. Is expressed in several structures, including central nervous system; head; liver; male organism; and pleuroperitoneal region. Orthologous to human MTCH2 (mitochondrial carrier 2).

GO:

id name namespace
GO:0045444 fat cell differentiation biological_process
GO:0043065 positive regulation of apoptotic process biological_process
GO:0048565 digestive tract development biological_process
GO:0001889 liver development biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005739 mitochondrion cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-991008-9 Acts upstream of or within digestive tract development; fat cell differentiation; and liver development. Predicted to be integral component of membrane. Predicted to be active in membrane and mitochondrion. Is expressed in several structures, including central nervous system; head; liver; male organism; and pleuroperitoneal region. Orthologous to human MTCH2 (mitochondrial carrier 2).

Ensembl:

ensembl_id ENSDARG00000019732

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00066374 False 1775 mRNA 0.44 13 38667066 38678090
TCONS_00066375 True 815 lncRNA 0.44 10 38667150 38674206

Neighbor

gene id symbol gene type direction distance location
XLOC_033929 BX957297.3 coding upstream 17537 38649136 ~ 38649529 (+)
XLOC_033928 ndufs3 coding upstream 72464 38588866 ~ 38594602 (+)
XLOC_033927 ptpmt1 coding upstream 84448 38577869 ~ 38582618 (+)
XLOC_033926 nudt19 coding upstream 133370 38529263 ~ 38533696 (+)
XLOC_033925 slc7a9 coding upstream 139233 38507006 ~ 38527833 (+)
XLOC_033931 BX957297.4 coding downstream 328 38678418 ~ 38678532 (+)
XLOC_033932 psmc3 coding downstream 1944 38680034 ~ 38685337 (+)
XLOC_033933 syt13 coding downstream 7564 38685654 ~ 38737718 (+)
XLOC_033934 znf408 coding downstream 66834 38744924 ~ 38750197 (+)
XLOC_033935 f2 coding downstream 72781 38750871 ~ 38760158 (+)
XLOC_033922 NA non-coding upstream 320587 38315655 ~ 38346479 (+)
XLOC_033917 BX323797.2 non-coding upstream 419319 38245927 ~ 38247747 (+)
XLOC_033916 BX323797.1 non-coding upstream 430826 38229070 ~ 38236240 (+)
XLOC_033915 BX323797.4 non-coding upstream 463673 38202538 ~ 38203393 (+)
XLOC_033951 BX908792.2 non-coding downstream 1035125 39713215 ~ 39713774 (+)
XLOC_033960 dre-mir-153a non-coding downstream 1807420 40485510 ~ 40485590 (+)
XLOC_033963 CU041319.1 non-coding downstream 2192541 40870631 ~ 40870748 (+)
XLOC_033965 NA non-coding downstream 2284638 40962728 ~ 41104337 (+)

Expression


Co-expression Network