XLOC_033933 (syt13)


Basic Information

Item Value
gene id XLOC_033933
gene name syt13
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 38685654 ~ 38737718 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00066380
CTTGCTACTTCTGTTAATATGTTGCATGATAATTTTCCACTGAAAAGtttatttctaaagatcagtTTCTTACaGTTCAGggatttaaaatcctgtaattttctaaacaaAAAAAttcaagaaaaCACAAAACACAACCCATTTTGGAAACCCCTAAGCCATGCTCGCTGGCTAGATACAGAAAAGGATCACACTGAACGAAtctGTTCCTGGGCAGACATTTTCATTTGttattacagtgtgcTGGGTCTATATGATGATTATTATTTGTCACTGTCACTGCCATGGAGTGATATGAACAATTTTTTG
>TCONS_00066381
GGTCCAGGTAGACCCACAACACCAGACCATTACCCAGAGAGCCCACGACAAACACCAGCAGGTACACGCTGGGGATCAGCACCCATGTTGGAGACCATTCTGTGTAGTCACATGAGGGGAAGGGAGAGGGTGAGGGGAAGGGCAGAGACCCGGACATTTGACAGCCACACACTTGCACCTAGTGCAGAAAGCCTGTGGAGGACATCGGCAGGACCCTCTGAGGATATAAGGGTGATTAGTTTTGAAGAAATGCTTGTTCGTAAACAGGAGGAAGCAACTTTGTCCTTTCCCAGAATTCTTGTTTATACTGTTTGGGAGTAAGCGGTGGCTCCTCAATCCTCTTTGATTTCTGTGGgGGTTTATCTCTGTTTCTGTTATTAATTGTGCCCAGTTTTCTCTTCTGTGTATTTAAAGCCTCTGTGTTTCCAGATGATCTTTTTAAATGAAGGATGTTGCTCGGTTTCCAAGATCTTCTCTTGATCATTCTCGACAACTTCTCCTTGTGATC
>TCONS_00066384
CCTCGAACTCTATCAGTTGACGATAATATAGAAGAAAAAACTTGGATATTAAGATTTACATATTACATACACATTTTTGGTCATGATATGCTGTCTAATTACTCTTGAACAGGCGTGCCCAACTGTGAtgctggagatctaccttcctccagagttcagcttcaaccctgatccaacacacctgaaccaattaagtAGGATCTGAagagcacttgataattacaggcaggtgtgtttgatatggaatgcaactaaaatctgctggaaggttgactaaaaatgttgggttccacaatCGTTTTGTGTTGAGACAAGATAATCGAAGtagcttattattatatatttttttgttttacaaatttaagtagattgaatataaaaaacgaatttgtcccaacaaaatctcaagaattttgttattttaactcattttaagtaagtaattCAAACAAGCAACAACAAATTTTTTTTGGCTGGAGATCTCCAAACACAGTGTTGGCCAACCCTGTCCAGACATCAAAAGTCATTCAAACATCAGTTTGAGATGATCTTTTTAAATGAAGGATGTTGCTCGGTTTCCAAGATCTTCTCTTGATCATTCTCGACAACTTCTCCTTGTGATCTTCCTCCTCTGTGTCACCTACAGGGAAAACGTCTGCTCTTTAAAGACCCTCTACTCTTTGTGTCCTCCTCCTCTATCAAAGGACCACCCCGTAGCAGTTTTGTGAGATCTCCAAACAGTCCCCCTGTACTTAAACACACTGAGCAAACTCGCAACACCTCAAGCCTGAAAGAGGCTTTGTGCACATCACAATGTCTTTCACCACTGTGAACATCAATCCTCAGCCAACACCATCACTACGTATTCCAGGTTGTATTAGCAAATACACATGCATTCATACAAATAATGAGCTAATATTTGACCTAAAACACTGGGAGGTCAGGAAATCAGAGACATTTTGTGCGGCCTGTTGTTATACAGAGCAGGTTGTATCACGGTGGatgattatttctttattatgaAGAGGGAAAATTAGAGCATTTGCATACATTGGATTATAATGAATTGGATTGTGATGTGAGGCCCAGAGGCATAATATTTAAACCCAGTGTTTGAACATATACAGATGTTTTTTGAGTGTACGATGTTCGTACTTTGGATTTCAattgctttttgtgtgtgtgtgacaatgcaataaaatgatttaagtaTGAAAGGGAGGAACAAGGACAAAATAATAAGTGAATATATTGCTTTCAGCATATACTTTATTTTCTGTGAGCTTTTTGGTTTCATTAATTTTTGATTCTTAAAATAGATTTTGATTCTTAAAATacattctttatttctttattttttataaagacCAGACAAACAGACTCTTGTAtacaaaaataaagcataaaaacaacaccaaaaaggaaaattGTGATGTAAAAGACAAATTTGACCTACCAAGTGTCTACAATAAATCtataaaaagg
>TCONS_00066383
CCTCGAACTCTATCAGTTGACGATAATATAGAAGAAAAAACTTGGATATTAAGATTTACATATTACATACACATTTTTGGTCATGATATGCTGTCTAATTACTCTTGAACAGGCGTGCCCAACTGTGAtgctggagatctaccttcctccagagttcagcttcaaccctgatccaacacacctgaaccaattaagtAGGATCTGAagagcacttgataattacaggcaggtgtgtttgatatggaatgcaactaaaatctgctggaaggttgactaaaaatgttgggttccacaatCGTTTTGTGTTGAGACAAGATAATCGAAGtagcttattattatatatttttttgttttacaaatttaagtagattgaatataaaaaacgaatttgtcccaacaaaatctcaagaattttgttattttaactcattttaagtaagtaattCAAACAAGCAACAACAAATTTTTTTTGGCTGGAGATCTCCAAACACAGTGTTGGCCAACCCTGTCCAGACATCAAAAGTCATTCAAACATCAGTTTGAGGGAAAACGTCTGCTCTTTAAAGACCCTCTACTCTTTGTGTCCTCCTCCTCTATCAAAGGACCACCCCGTAGCAGTTTTGTGAGATCTCCAAACAGTCCCCCTGTACTTAAACACACTGAGCAAACTCGCAACACCTCAAGCCTGAAAGAGGCTTTGTGCACATCACAATGTCTTTCACCACTGTGAACATCAATCCTCAGCCAACACCATCACTACGTATTCCAGGTTGTATTAGCAAATACACATGCATTCATACAAATAATGAGCTAATATTTGACCTAAAACACTGGGAGGTCAGGAAATCAGAGACATTTTGTGCGGCCTGTTGTTATACAGAGCAGGTTGTATCACGGTGGatgattatttctttattatgaAGAGGGAAAATTAGAGCATTTGCATACATTGGATTATAATGAATTGGATTGTGATGTGAGGCCCAGAGGCATAATATTTAAACCCAGTGTTTGAACATATACAGATGTTTTTTGAGTGTACGATGTTCGTACTTTGGATTTCAattgctttttgtgtgtgtgtgacaatgcaataaaatgatttaagtaTGAAAGGGAGGAACAAGGACAAAATAATAAGTGAATATATTGCTTTCAGCATATACTTTATTTTCTGTGAGCTTTTTGGTTTCATTAATTTTTGATTCTTAAAATAGATTTTGATTCTTAAAATacattctttatttctttattttttataaagacCAGACAAACAGACTCTTGTAtacaaaaataaagcataaaaacaacaccaaaaaggaaaattGTGATGTAAAAGACAAATTTGACCTACCAAGTGTCTACAATAAATCtataaaaagg
>TCONS_00066382
CCTCGAACTCTATCAGTTGACGATAATATAGAAGAAAAAACTTGGATATTAAGATTTACATATTACATACACATTTTTGGTCATGATATGCTGTCTAATTACTCTTGAACAGGCGTGCCCAACTGTGAtgctggagatctaccttcctccagagttcagcttcaaccctgatccaacacacctgaaccaattaagtAGGATCTGAagagcacttgataattacaggcaggtgtgtttgatatggaatgcaactaaaatctgctggaaggttgactaaaaatgttgggttccacaatCGTTTTGTGTTGAGACAAGATAATCGAAGtagcttattattatatatttttttgttttacaaatttaagtagattgaatataaaaaacgaatttgtcccaacaaaatctcaagaattttgttattttaactcattttaagtaagtaattCAAACAAGCAACAACAAATTTTTTTTGGCTGGAGATCTCCAAACACAGTGTTGGCCAACCCTGTCCAGACATCAAAAGTCATTCAAACATCAGTTTGAGCCTCTGTGTTTCCAGATGATCTTTTTAAATGAAGGATGTTGCTCGGTTTCCAAGATCTTCTCTTGATCATTCTCGACAACTTCTCCTTGTGATCTTCCTCCTCTGTGTCACCTACAGGGAAAACGTCTGCTCTTTAAAGACCCTCTACTCTTTGTGTCCTCCTCCTCTATCAAAGGACCACCCCGTAGCAGTTTTGTGAGATCTCCAAACAGTCCCCCTGTACTTAAACACACTGAGCAAACTCGCAACACCTCAAGCCTGAAAGAGGCTTTGTGCACATCACAATGTCTTTCACCACTGTGAACATCAATCCTCAGCCAACACCATCACTACGTATTCCAGGTTGTATTAGCAAATACACATGCATTCATACAAATAATGAGCTAATATTTGACCTAAAACACTGGGAGGTCAGGAAATCAGAGACATTTTGTGCGGCCTGTTGTTATACAGAGCAGGTTGTATCACGGTGGatgattatttctttattatgaAGAGGGAAAATTAGAGCATTTGCATACATTGGATTATAATGAATTGGATTGTGATGTGAGGCCCAGAGGCATAATATTTAAACCCAGTGTTTGAACATATACAGATGTTTTTTGAGTGTACGATGTTCGTACTTTGGATTTCAattgctttttgtgtgtgtgtgacaatgcaataaaatgatttaagtaTGAAAGGGAGGAACAAGGACAAAATAATAAGTGAATATATTGCTTTCAGCATATACTTTATTTTCTGTGAGCTTTTTGGTTTCATTAATTTTTGATTCTTAAAATAGATTTTGATTCTTAAAATacattctttatttctttattttttataaagacCAGACAAACAGACTCTTGTAtacaaaaataaagcataaaaacaacaccaaaaaggaaaattGTGATGTAAAAGACAAATTTGACCTACCAAGTGTCTACAATAAATCtataaaaagg
>TCONS_00068915
gtgtttgatatggaatgcaactaaaatctgctggaaggttgactaaaaatgttgggttccacaatCGTTTTGTGTTGAGACAAGATAATCGAAGtagcttattattatatatttttttgttttacaaatttaagtagattgaatataaaaaacgaatttgtcccaacaaaatctcaagaattttgttattttaactcattttaagtaagtaattCAAACAAGCAACAACAAATTTTTTTTGGCTGGAGATCTCCAAACACAGTGTTGGCCAACCCTGTCCAGACATCAAAAGTCATTCAAACATCAGTTTGAGGTAAAAGAACTGCTGATCTCCATAATCACTTCAAAGTATTTGCTTAGTTATTAATAATTGGCTTTTTTATACTTGACTAATtcacatattaaaatgttttattttatggcaAGTTGCATGATAATTTTCCACTGAAAAGGTGTTTGTTAATtaagtaaatatgtaaaaataataataataataataggttcaATTGAAATACTGATATTACAGAGATTTCATAGAACAACCATTTGGGTTTTAACAAAGAGCCTTTCCATAAACGTTTTCAGAAAACAATTTTCTTAAGTCAAAGAACATTTAGGTATTTAACTACAGagcttttttgttttctttacagcttataaatattgttttataaaacTGAGTGTCCATAGATGCTAACGTcttcttaaatctttttttgatGCCATTATGTTGGACTTTCTGTCCTGTTTAATACACAACTGAAGAACCATTTCCAGACAAATAGCATaccatatcaaaaaaaaaaaaatccacaaaaagGATCGTGCAAATGCAGTACTACTCTGTCACACCtaaggttaataaaaaaaaaaatcctactcaaGCCAAACATCTCATACAGTACCTGCTTTTGTGAAGGGTTTATCTCTGTTTCTGTTATTAATTGTGCCCAGTTTTCTCTTCTGTGTATTTAAAGCCTCTGTGTTTCCAGATGATCTTTTTAAATGAAGGATGTTGCTCGGTTTCCAAGATCTTCTCTTGATCATTCTCGACAACTTCTCCTTGTGATCTTCCTCCTCTGTGTCACCTACAGGGAAAACGTCTGCTCTTTAAAGACCCTCTACTCTTTGTGTCCTCCTCCTCTATCAAAGGACCACCCCGTAGCAGTTTTGTGAGATCTCCAAACAGTCCCCCTGTACTTAAACACACTGAGCAAACTCGCAACACCTCAAGCCTGAAAGAGGCTTTGTGCACATCACAATGTCTTTCACCACTGTGAACATCAATCCTCAGCCAACACCATCACTACGTATTCCAGGTTGTATTAGCAAATACACATGCATTCATACAAATAATGAGCTAATATTTGACCTAAAACACTGGGAGGTCAGGAAATCAGAGACATTTTGTGCGGCCTGTTGTTATACAGAGCAGGTTGTATCACGGTGGatgattatttctttattatgaAGAGGGAAAATTAGAGCATTTGCATACATTGGATTATAATGAATTGGATTGTGATGTGAGGCCCAGAGGCATAATATTTAAACCCAGTGTTTGAACATATACAGATGTTTTTTGAGTGTACGATGTTCGTACTTTGGATTTCAattgctttttgtgtgtgtgtgacaatgcaataaaatgatttaagtaTGAAAGGGAGGAACAAGGACAAAATAATAAGTGAATATATTGCTTTCAGCATATACTTTATTTTCTGTGAGCTTTTTGGTTTCATTAATTTTTGATTCTTAAAATAGATTTTGATTCTTAAAATacattctttatttctttattttttataaagacCAGACAAACAGACTCTTGTAtacaaaaataaagcataaaaacaacaccaaaaaggaaaattGTGATGTAAAAGACAAATTTGACCTACCAAGTGTCTACAATAAATCtataaaaagg
>TCONS_00066385
TGGTCACACCTCCAGTGTAGCAATTACCTTGTGACTGTGGTGACAAGTAGTTTTGTAGTGATTAGAATTTTACATGTTTAAAGAACAGTTATTGTTACAATGATGCCTCAAAATGGTGCGTTGTAATAGTAAATTGTAAACCTAAAGAGCTTTTCGAGTGTAATATTCTGTTAAGTATAGGAACAGAATTACTGAAATCCACGCCAGTCCAAATAGAGTCCACGTGGCATTGAAAAACATGCAATTTGGTTGTCCTTAAAAATTGGGAATCCTTTAATACTGTAAGTGTATTTGAAGCTCTGCTACAGCTCACCCAGCGTGTGAAGGAATGCTGGTGTCTGCGACAGCGCTGTTGGGGGCTACGCTGGGCACAGTGTCTGGAGTGTTGACACTATGTGGTCTCTCCCTGCTTTGCAAGAGCTGTAAAAAGGGGAAACTTGAGAGTGGAGATGAGGCTGACCCAGAGAAAGCCAAACCTAGTATCCTGCATACTCTGACACAGTTCAGTGTGCATAAGTGCACTGAACCCATCCAGCCTCAAGCATCTCTGAAGTTTCCTCAAATCTACCGGCCCAAACCTTCTGTGACTTCTCAAGAGGTGATAAACTACAAAGAACATGGAGCTTCCAATGACACGTCTGCAGCCGAGCTCGACACCTGTAACCAAGCAACCGAACGTGAGGAGGTTTTCTCCCTCCCGCGGCAAGCTTCTGCTGATGAAATACCTTGCTCATCTGAACAAACTGGTGCCATGACGACAAGTAGCTCCATCCTGTATCCGAAACTGCACTTCTCCATCAGCCTGCACAAAGAAAGCGGAGAGCTACACATTAACATTGTTGAAGCGGAGAATATATCAGTGGAAGCAGGCTGTGAGGGATATATATCAGGGTGTGTCAGTGTCTCCGAAGAgcagaaacatgcacacacagcgGTCCACAAGCTGGCAGTGCATGTGCAGTGGGGCGAGGAGCTGGTGTTTGCACTGCCTATGGAGAGCACAGAAGACACTGACAGTCTAGATGGAGAGGTGGCGCTTTCCCTTCACTGCTGTGACCGATTCTCCCATAACTCCACTTTGGGCATGATGCGCTTCAAGCTGGCTGATGTGAGCATGATGTTGGACGCCGACTGCTGGGTTGACTTACAGCCACCCAAACAGgaagtgacatcatccACTGGAGAATTACTACTGTCGCTCAGTTATCTACCAGCAGCCAACAGACTTGGGGTGGTAGTAATGAAGGCTAGAGGACTCCAGTCAGATAAACTCAAAGACAACATAGATCTATCCGTAAAGCTGACCTTAAAGCACCAAAATGCCAAGCTGAAGAAGAAGCAGACGCGGCGAGTAAAGCACAAGATGAATCCAGTCTGGAACGAGATGATGATGTTGGAGCTGCCAAGTGAGCTTCTGGCTAAATCCAGTGTGGATTTGGAGGTACTGAACCTGGCCAGCCCCGGGACCCTGCTCCCTCTGGGCCGCTGCATGCTGGGGCTCCAGACATCCGGCACTGGCCTGCAGCACTGGAAACAGATGCTAGATAATCCACGCAAACAAATCGCAATGTGGCATCCTCTATACACCTAATGTACAGGGTAATAGTCTCCAAAGCACCACCAATGTGATAAGCTAAACGGGTGGTTGGGTTAAGCTAGTACTCTATTCCTGTGTAAAAATATGcagtactaaaatatatatatatatatattaaacagtaGTTATGTGTGAACCCAGTTGTCATTATTTGGTAAAGTGAAAGTTAAAGCTGAATGGAGACGGTCACATACAGTACTAATATTGTTACACAGTAGTTTAGAGTATTTTACAGTGATGCATTTACCTTCGGTGTTGTTGTTAATGTGGGTTTAAAGTACTCAATGCTATTTTAAACAGGTTCAACTTGGAGAAATCCTCCTCTCCCTATATATGTGAAATACAAAATACGACTAAAAAGACCCATATTTAGCTAGTATTATAGTGACTGAGTGAAATATAAGACAAACAGCTTATTTGTGATCTGATGTAAGGTGTAAAGCTGGGCTGAATCAGGTCAGAGAAAAGGATAAACCGCTGTATCTTACCAGGTTTGGCAGAAGAGATGACGATAAAGGAACAATCACAACAAATAATACGTGAAAACAGTCTCTGCCAAATGATATTATATGATCCACAGGCAGCATTTTTCGGACAGCATCAGAATGCAGAAGGGATCCTTTTAGTTTTGCTGTCATAGCTGGAGTGATGGAGAACTGATCACTTACTGTAGATTGATTGTGGCCGTTACATTTACAGGAGTTACGCACTACATTATTATACAGGGTCTCAAAAAGGCAGCTTTATTCTTCTCAAGATGCATGTATAAAGGATGTATtactatgtaataaaaaaattgtgtgtgtgtatatatacatatatatatatatatatatatatatatatatatatgcacatacatatgtatgtactgtatgtatatgcCGTTGaagacataattattagccctcctgtgaaattgtaatgCTTTTACAAGTATATTCCATGTGCTGTTTAATGTagagaatttttttcaacacatttttaaacaataattttaatactaatcgcttataactcatttattttgtcgtttgccaggatgacagtacGTAATATGgttctagttattttgcaagatactattctgttaaaagtacaatttaaagggTAATTAGGTCAGCTAATCAAGTCTGgttaaggcaagtcattagacaaaagtggtttgttttgtagccaatcaGGGTGTTTCtctgaaaaccatcattagccaactaagatcTTAAGTTCCATCgatacaaacatagtttgttaattTTTGGCGTTCCCCAAATCCGtcattccaacaaacattcacaaactgtgTCACAAACTTGtgcgcttgcaactacacctctggagctgtagttagaaacatagttcctggctgtattctattcccacttatcctcTCTATAtgtcctattcatttagaacattccaacatttaaacttggaatgattaaaaaaaaaaaaaagctttaaagtcTTGACTTTAATGACCCtgtgttattattttaaacacagccgtggctcatggtGGTTAATAATATTCATCTTAAATTATTTGATTGcagatttatttaagttttaattcCAGCAAAGCAACaacactttctctagaagaaaaaatattataggtgaTACAAGTGAAAACTTCCTATCTTCGTAAACAActatggaaatattttaaaattaattagatCATCACAGGAGGGCTAAGAATTTTGCCTGTATAACTAAGCAGGACATCTACTCTGGGCTCCAGACTGCCACTAAATCAGTGTTCTGTTAATATGACAAAGGTAAAGTAAAATAGCTGTTGCCGTTTTTATTAATCAACTGAATTCATATCCATTAACAGTACAAGTGTGtcattgtgttgtttgttttatttctaaatatttatagCTCATTCGTTGCGTTATCCCAACTCTAGGTCAAGATGCTGCATTTCTAAGAACCAAGAAACCAAGCATGTTGTTTTATTACTAGTGTAGTGCTGGTACTGCTATCTGTACAACTTGGTGTCACCGGTGCTATTGCTCGCAAATGTTACTCTGGAGCCCTTTGATTATATACTTATTACTCAGTTTAAAGAACTATAGGTATATTACTTGTCAGACACATGCTGAATGTCGATATCATTATGTTTGTCCCATATAAAAGTAGCTTTTTTTTCACCCAAATACCAACCATTCCCCAAGCCAAACTGTTCTCTTATTCCATATGTATTTGTGTTTCACCAGGAATGCACATTTTGCAAGACAAATGCCTGACAACTGCAGGGATTAACAGTAAAATGTAGGCCTCCCAAATACAAATACCAACTACAACTGACCAATGCATCCAAATTCcacttaaatatatgtatataactatatatgtGCTATAATCAACAATCAAGTGACAAACCAAATGAATAAGTAGAAAAATACTAAGCTTTCACACAAGATATCTGCTGAAGTATTTGTTGTGTGTTTAAGTGTTACGTGCTCTGTGCAACCTGATCAAAATATAATCTCCATCTTGAATAAAATGATCAATTATTCATCAGAAAGAATTATTTGTAATGTCATAAACTTAAATACACTGTTTTAAACTCTCTAAAGTATCTGTGAATTAGCAGTTTTCTATAATCTGTGATtcatcttatttatttttcatttatttatgcatttgaattgTTTTGAGACCTTAATCTTTCCTccgacaacttttaaccttgacaagttcaaaaatgtgacttttattaacatatttaatagtttaaagggatatattatctgggttggtgttgtatttaCGGTATAAAAACCTTTTTCCTCTATATTTGTACAATtgtttatacaatatattatttcaaactgccaaaatgtcaataaaagccactttgttaaactgtacaattggattttcaacataaaaagttaacagagcagagatcaaggtctcataaagCCTGTAAttcaaaaccaaaaataaatagaaaatacaaTACAGAAGATGTTaattaacatctttttttttaacagtgtgtgcAGTATTTCACTAGTAACGCTGCAATATCACATATGTTGACCTATTTTGATAAATGCAGCCTTTAGATGTATTTGTGAAAGAGATTTGTGAAATCTCCTGTTTTAATTTGCCCATCTgtcatatttaaaaatcaaatcatTTGCTGCAGTGAATATCGAATTCACATTttcacaattcacatttatttctgTGCCTGATACTTTTGCCGAGAAGGAGGATATATGACATGTTAAGCTCTGAAATCTGATTTACAGTATTTATAAGACTTGCTGCATCCTGATTTCATATACAGACAGAAATGTATTACTATTTTTAACCCACAGATATGCTCGAAACGAATAGCCTCTTGTTGGTGTCAAATAAATATTCCTTTCAGAAATTGTGCTATATttcatgtgtgtttgtctgaTGTCAGAGATCTGGCGCATCTATTTATAGAACTGGTCAGATTTGAAAGATGACACACAAGATGAGGAAGTGACAGAGATCCATACGAACAACTCCTACGATGAGCACCAAATGAACACACGCTGACGAAAATATCAGTGAgaatgcaaaacaaaataaatggagTGTGTAAACACTGGT
>TCONS_00066386
gtGCCACTCTATGTGTCTCCTCTCCTCTCTCCTCCTCTGCAAGCATGGAGTCACATCATCACTGAAGTGTGGATTTGCTCCTCTTGTTTTCTCCTCTTCTCTTcattcggtgtgtgtgtgtgtgtgtttggttgtctGTTCCTGGGCAGGAATGCTGGTGTCTGCGACAGCGCTGTTGGGGGCTACGCTGGGCACAGTGTCTGGAGTGTTGACACTATGTGGTCTCTCCCTGCTTTGCAAGAGCTGTAAAAAGGGGAAACTTGAGAGTGGAGATGAGGCTGACCCAGAGAAAGCCAAACCTAGTATCCTGCATACTCTGACACAGTTCAGTGTGCATAAGTGCACTGAACCCATCCAGCCTCAAGCATCTCTGAAGTTTCCTCAAATCTACCGGCCCAAACCTTCTGTGACTTCTCAAGAGGTGATAAACTACAAAGAACATGGAGCTTCCAATGACACGTCTGCAGCCGAGCTCGACACCTGTAACCAAGCAACCGAACGTGAGGAG

Function

symbol description
syt13 Predicted to enable several functions, including SNARE binding activity; calcium ion binding activity; and phospholipid binding activity. Predicted to be involved in several processes, including calcium-ion regulated exocytosis; cellular response to calcium ion; and regulation of secretion by cell. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in several cellular components, including axon; exocytic vesicle; and synapse. Is expressed in nervous system and trigeminal placode. Orthologous to human SYT13 (synaptotagmin 13).

GO:

id name namespace
GO:0071277 cellular response to calcium ion biological_process
GO:0006906 vesicle fusion biological_process
GO:0016192 vesicle-mediated transport biological_process
GO:0017156 calcium-ion regulated exocytosis biological_process
GO:0017158 regulation of calcium ion-dependent exocytosis biological_process
GO:0014059 regulation of dopamine secretion biological_process
GO:0043005 neuron projection cellular_component
GO:0030424 axon cellular_component
GO:0045202 synapse cellular_component
GO:0005886 plasma membrane cellular_component
GO:0070382 exocytic vesicle cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005509 calcium ion binding molecular_function
GO:0001786 phosphatidylserine binding molecular_function
GO:0005544 calcium-dependent phospholipid binding molecular_function
GO:0000149 SNARE binding molecular_function
GO:0030276 clathrin binding molecular_function

KEGG:

id description
ko04131 Membrane trafficking

ZFIN:

id description
ZDB-GENE-050417-135 Predicted to enable several functions, including SNARE binding activity; calcium ion binding activity; and phospholipid binding activity. Predicted to be involved in several processes, including calcium-ion regulated exocytosis; cellular response to calcium ion; and regulation of secretion by cell. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in several cellular components, including axon; exocytic vesicle; and synapse. Is expressed in nervous system and trigeminal placode. Orthologous to human SYT13 (synaptotagmin 13).

Ensembl:

ensembl_id ENSDARG00000012306 ENSDARG00000098951

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00066380 False 309 mRNA 0.35 17 38685654 38730609
TCONS_00066381 False 508 lncRNA 0.47 2 38687268 38689550
TCONS_00066384 False 1485 lncRNA 0.35 2 38688249 38690412
TCONS_00066383 False 1383 lncRNA 0.35 2 38688249 38690412
TCONS_00066382 False 1500 lncRNA 0.35 2 38688249 38690412
TCONS_00068915 False 1933 lncRNA 0.33 1 38688480 38690412
TCONS_00066385 False 5206 mRNA 0.38 8 38716048 38737718
TCONS_00066386 True 508 mRNA 0.51 2 38717624 38721569

Neighbor

gene id symbol gene type direction distance location
XLOC_033932 psmc3 coding upstream 317 38680034 ~ 38685337 (+)
XLOC_033931 BX957297.4 coding upstream 7122 38678418 ~ 38678532 (+)
XLOC_033930 mtch2 coding upstream 7564 38667066 ~ 38678090 (+)
XLOC_033929 BX957297.3 coding upstream 36125 38649136 ~ 38649529 (+)
XLOC_033928 ndufs3 coding upstream 91052 38588866 ~ 38594602 (+)
XLOC_033934 znf408 coding downstream 7206 38744924 ~ 38750197 (+)
XLOC_033935 f2 coding downstream 13153 38750871 ~ 38760158 (+)
XLOC_033936 arhgap1 coding downstream 24325 38762043 ~ 38785745 (+)
XLOC_033937 harbi1 coding downstream 70309 38808027 ~ 38810706 (+)
XLOC_033938 zgc:110699 coding downstream 74082 38811800 ~ 38822387 (+)
XLOC_033922 NA non-coding upstream 339175 38315655 ~ 38346479 (+)
XLOC_033917 BX323797.2 non-coding upstream 437907 38245927 ~ 38247747 (+)
XLOC_033916 BX323797.1 non-coding upstream 449414 38229070 ~ 38236240 (+)
XLOC_033951 BX908792.2 non-coding downstream 975497 39713215 ~ 39713774 (+)
XLOC_033960 dre-mir-153a non-coding downstream 1747792 40485510 ~ 40485590 (+)
XLOC_033963 CU041319.1 non-coding downstream 2132913 40870631 ~ 40870748 (+)
XLOC_033965 NA non-coding downstream 2225010 40962728 ~ 41104337 (+)
XLOC_033966 AL772146.1 non-coding downstream 2375183 41112901 ~ 41113295 (+)

Expression


Co-expression Network