XLOC_034659 (zgc:194312)


Basic Information

Item Value
gene id XLOC_034659
gene name zgc:194312
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 20334345 ~ 20379424 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00067468
CTGTACGAGCGGGGACTGAAGCAGCGGTAGGATGTCAAATAATACCACAAATGACAGCTCGTATCCCCACATACGCGTTTGGGCGTCGGGGGTTTCTCTGGTCATCTTGGCTCTTTTCAACCTGGTCATCAACTGGACCATCGTGCGGGAGCAGAGGCTGCGGAGCCACGCGCGCTTCGTCCTCGTTTTTCACCTGCTGTTCTCCGCGCTGGTTTACTTTGCGCTCTGCTTCAGCTTCTACTTACAAAACTATCTGAATGCGGCCACCACGGCCACCACATGCACGGTGCTAATAAGAGGACTGATGACCAGCGGTTCCAACATCATCCTCACCATCACGGCGATGGCGCTGGACCGTTATTTCGCCATCTGCTACCCGATGCACTATGGTAAAGTGTTCTTCAAGCCGTGGCCCTGGTTCATCGGGATCCTGACATGGGGACTCGCGTCTGTCATTCCTCTCACTGTGACCCCCAGGAACGCCACGGGAACCTGCGGAAGGAAAGATTTGCAGGGTGGGGAAACACACAAAATCCTTTTGATATCGATTTGCACTGCTCTCATCGTGTGCAGCTATGTGCGGATCTTATATGAGGGGCGACGGCTGGGTGTGTTTAACCGGCGCAACCGAGCTGCGTGTCGGACTATCGCTCTCCACGGAACGCAACTCGCCGTTTACATCCTCCCAAACTTTATACTGTTTTTCCTGCATATTCTCAAGAATAAGGATTTGTTCACATCTGACACCAAAGAGCTTTTTGCTGTCATAAGCTTTGTGTTCTTCAGTCTGGCGCAGTGTTTCGCGCCGATAGTGTACGGACTGCGTAAAGAGGAACTACTGGAGCATCTCAGTCATCGGTTCCCGTGTTTATCTGGCCGGTTAAAACTCATCTTGGAGTGGACTGTCAACATCGCCCATCCCAAACGATGTCGCCAACAACGagagCGGAGGATGACTTCAGAGACTTTACTATCTCGAGAGATCTCTCAAACCACTGTTTGACCACATTTGGATTAAGAAACAAGCCCGCTGTTGGTTTCTTCAAACGAAATATGCACAAAACAAGCCTGAAACTAATACTGAATCAAGGTTTTCACAATGCAACCTTTTTTAAATCATCTGCGAAATTCAGGAAACACAATTTTCCACTGTTGACTTACAAAACTTCAAGACACAAATTCATCAAGTTAGGATACAATACCGCAACCATGTGTTCAGGAGTCACTCTTGCCAAAAGTGTGATTTTCAAGGCAGCAACATTAACTGTAAATAGTACTAATGACTTACTCATGTGATGCGTCATGTGAACAAGGGGAAGCTATGTGAAGATGCCTGGTTGTAAACGCTCAtatttgtaaaagcgctacagacgTCATCTCTGGTATTGTTTGATTTAGCCCAAACAGTATTTTGCAGTCATTAACATAAATAAGCTAAAGACCCAAGTAAGACTTGGATTTGTACAACTGTGAAGCAAGATTgtcatgtacagtatgtgttgtgAAACTGTAAGATTTGTAGAATTAGATATATTATTTCTGACACTGCCACATCCTGAGTTGACAAGACACCCTGTTTAATAAGGTCATTAACGTTCATCAACAGTTTCCTGTAAACGCTCTCTTTACAATATATGTTCACTTCCTTCAGAAGCCAGTACACTTGGTGAAAGGACCTACTGTAATGCATGATGGTTTTAAAGCACTGGAACAAAGGGCACATATTTATAATAACGCCTTTTCCTTGTATGATACAACTGTGATATTAACAGATATTCTCTGTATACCTGCTTAATGCCTTTCGAGAGATGCTGCAGTAGCAGAAGaacaacaaatatacatttaagaGAAACTGTTTAACGTAAAACGTGTAAGAGCAGAACCAACGGTTTGTGTCATTGTCTGGTTTAGCAAACAATGGTGCAATAAGCATTTTATCTGCACTTCTCTATTTGTACTGCGTGTGGTCTTGGATTTCATGCTTTTGTACACTTGTAATAAAAACCTTTTGtatttatgcaaaata
>TCONS_00067469
tgtatgtgtgtgtcgttgtgtgtcaCAAAGAAACAAAGAGCACAATACAGTGTATCAGgttcgacatgttgtacattcagGTGtagtttttgtttctgttttctgGTCAGTTGGAtttccttatccatgaaaatAAAGAAGAGTAAAaggaaacacactacggccaatttggtgactaaaatAATTAGATAT

Function

symbol description
zgc:194312 Predicted to enable odorant binding activity and olfactory receptor activity. Predicted to be involved in detection of chemical stimulus involved in sensory perception of smell. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane.

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-081022-102 Predicted to enable odorant binding activity and olfactory receptor activity. Predicted to be involved in detection of chemical stimulus involved in sensory perception of smell. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane.

Ensembl:

ensembl_id ENSDARG00000077414

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00067468 False 2026 mRNA 0.44 2 20334345 20338048
TCONS_00067469 True 192 mRNA 0.35 9 20334839 20379424

Neighbor

gene id symbol gene type direction distance location
XLOC_034658 si:ch73-335l21.4 coding downstream 92932 20239915 ~ 20241413 (-)
XLOC_034657 NA coding downstream 95210 20234414 ~ 20239135 (-)
XLOC_034655 acap1 coding downstream 175965 20058857 ~ 20158380 (-)
XLOC_034656 BX322601.1 coding downstream 200482 20132336 ~ 20133863 (-)
XLOC_034654 NA coding downstream 283550 20045387 ~ 20050795 (-)
XLOC_034660 ntn5 coding upstream 52209 20431633 ~ 20453661 (-)
XLOC_034661 cnpy4 coding upstream 80247 20459671 ~ 20464468 (-)
XLOC_034662 NA coding upstream 122856 20502280 ~ 20574689 (-)
XLOC_034663 zpax4 coding upstream 198270 20577694 ~ 20582921 (-)
XLOC_034664 si:dkey-19b23.8 coding upstream 221250 20600674 ~ 20611039 (-)
XLOC_034652 CR339062.2 non-coding downstream 378153 19956078 ~ 19956192 (-)
XLOC_034641 NA non-coding downstream 829078 19499980 ~ 19505267 (-)
XLOC_034665 NA non-coding upstream 250071 20629495 ~ 20667696 (-)
XLOC_034671 NA non-coding upstream 709129 21088553 ~ 21093899 (-)
XLOC_034672 NA non-coding upstream 1406171 21785595 ~ 21838440 (-)
XLOC_034673 BX005336.3 non-coding upstream 1443939 21823363 ~ 21823527 (-)

Expression


Co-expression Network