XLOC_034982 (BX322787.1)


Basic Information

Item Value
gene id XLOC_034982
gene name BX322787.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 41401488 ~ 41420226 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00068033
AAACATTGCTTCCTCGTAGCAGTCACAGATACTTCTAGTCTTTTCTGTGTAGTGTTTCATCTTTTTACCATGAAGGAAAGCAAAAACTCATCAGCAGTCAAAATCCTCCTTATTCTCATCATTGTACAAGGAGCCATGGGCCGTGTGATTGATTCATGGGAACAGTCCTCAGAGGACATTAGTTGGTCAGGATCTGGGGAAGGAGCCCAAGGCCCAGATCGAATGAAATCAGTCATCATAGGACCTGAATTAATGCAGGAACAAAATGATGTCCCGGACTACTGAATGAAGAAGACAGTGCCTCTGCCCAACATTAAGattcttcaaattattttaatgaaattacaGTTCATAAGAGATGGCATACATATATAATGTGATTCTACTGTTAATAAGTACATTAAAAACTCAAACATTTAATAGTGTTTGAGATTATACATTGATTTAACTTCAATAAAAGGCAATCAAATAATAA
>TCONS_00069277
gctgagtcaggcccgattatcttttaatcttttcctgtttaaaaataaaaaataaataaataaaaaataagagatTCTTATAGTAGCAGTGTAACTGCAATGAGGAATCCATACGGtttctaaatattttgtaatgtaGCCAATGTCACGAACAAAACCAGACTTGTTTCACAATGAGGGACATTTATCATATCTAGTGAGAAGCAGCTCTCTTTCTCAAAAAAATACTCACCCATACAGGTTTTCATTGTTGAAAACTGTTGCGACCGATACCTTGTCTAAGTATGTATTTCTAACTTAGCTACACTTCAGGATAAAAACTTCTTTCCTAATGAGACACGGGCCTCTATTAGGAATCTTGTCCCCCATTTAGAAAGGTGAACACATGCGTGTGCAATGTCTCCAGTCTTGTGGTTGCACATCTGCATCTGTCCAGAGCACTCAGTGTGTTtccaatgtattattaatattatttattttgtttatcttttagtttatctatttagtaatttatttagtttattttaaaaaactgagTGTCATGTTTAATCACGAGGGTAAAAGTCATATTATGTCATTCTCTTCCACCTACACTCCTAACAACAAATACCCTTTCTAAAGCTTATAGACTGTATGTATTAATGAGATGACTAATTATcaagcatgtaaaaaaaaaacttcggtACGCCCTTGCTTTCACAACTATAAGATGTCATCTTCACCGACTGCAAGATAAACATTGCTTCCTCGTAGCAGTCACAGATACTTCTAGTCTTTTCTGTGTAGTGTTTCATCTTTTTACCATGAAGGAAAGCAAAAACTCATCAGCAGTCAAAATCCTCCTTATTCTCATCATTGTACAAGGAGCCATGGGCCGTGTGATTGATTCATGGGTAAGATGAACAAACCTATACTCATACTGTGAATACATTCTCTTTTTTATTGATCTTTAAGGTGTAGTGTATGATAGTGAGTTAACAGGAAAGCTTTAGACAAACAGTGCAACTCAGAAAGTGCCTTTATGACTCTGCGCtaagattttttctttttgagcTTTAATGTTTctgaatattaaattataataagggttccttctattattattataattattgttacttTTAGCTTTGGTTTAGTGTAATGAAagaacagttgaagacaaaatgatttgcccttctgtgaaattataattctttttcaatgttttcaaaagGGGTGTTTATCAAAGAATGGAAATTAAGGTTAATATTACTATCCCCCTTAATTGAAAGTAACTTGCCTTGTTAATTAACCTGGTTTTagtctttaaattgtattttaaactgATTACTtctaaatatctaataaaataataatgcactgtcatcatggttaAGACAAAAgtaacgagttattaaaacttttttttttaaaatgtgttttttacacTTAGACTTGTGTcatgctttacaataaggttttattagttactgtatttactaacatgaactatgtTTGTACAATATTTAACTAATGCATTGACTCATTTACTAATACATTGTTGACATCcaaatccatgcttgttaacattagtaaatgcactgtgcgttaacatgaattaacaatgaacaactgtattttcaacatgaacaaatactgtaatacattTGTTGGTCATTGTTTGTGCATGTTACATGcgttaactaacattaattaacacaaccttactgtaaagtgttacttaTACtcgtgaaatatttgaaaataaaatggcGCTTTTGTTGGATAAATGCATTCTTGTCTGCACACAGTTTACACTTGGACGTAAGAATTTGATGTCTAAAATGAACACGGTGCAATTTCTTTTCTCCATTCTAAATCAGGAACAGTCCTCAGAGGACATTAGTTGGTCAGGATCTGGGGAAGGAGCCCAAGGCCCAGATCGAATGAAATCAGTCATCATAGGACCTGAATTAATGCAGGTTATACTAATAAATATCATTTGAAGTATAGAAATATTCTAAATTGAAAATATTCGAAAGTATTCTAAACATTTATCTTGTTTATATTCAGGAACAAAATGATGTCCCGGACTACTGAATGAAGAAGACAGTGCCTCTGCCCAACATTAAGattcttcaaattattttaatgaaattacaGTTCATAAGAGATGGCATACATATATAATGTGATTCTACTGTTAATAAGTACATTAAAAACTCAAACATTTAATAGTGTTTGAGATTATACATTGATTTAACTTCAATAAAAGGCAATCAAATAATAA
>TCONS_00068034
TAATGCATTGACTCATTTACTAATACATTGTTGACATCcaaatccatgcttgttaacattagtaaatgcactgtgcgttaacatgaattaacaatgaacaactgtattttcaacatgaacaaatactgtaatacattTGTTGGTCATTGTTTGTGCATGTTACATGcgttaactaacattaattaacacaaccttactgtaaagtgttacttaTACtcgtgaaatatttgaaaataaaatggcGCTTTTGTTGGATAAATGCATTCTTGTCTGCACACAGTTTACACTTGGACGTAAGAATTTGATGTCTAAAATGAACACGGTGCAATTTCTTTTCTCCATTCTAAATCAGGAACAGTCCTCAGAGGACATTAGTTGGTCAGGATCTGGGGAAGGAGCCCAAGGCCCAGATCGAATGAAATCAGTCATCATAGGACCTGAATTAATGCAGGAACAAAATGATGTCCCGGACTACTGAATGAAGAAGACAGTGCCTCTGCCCAACATTAAGattcttcaaattattttaatgaaattacaGTTCATAAGAGATGGCATACATATATAATGTGATTCTACTGTTAATAAGTACATTAAAAACTCAAACATTTAATAGTGTTTGAGATTATACATTGATTTAACTTCAATAAAAGGCAATCAAATAA
>TCONS_00068035
GTACAGTTACATCACACTGTCGTCAGCAGCACGCTGAAGCGTGTATGTCTGACCAGCAGGCGGTGATCTGCTCTTCACCAAATACGGTCAGTGCGCGCGCGTCCTGAGCTGCCTACCCGGGCGCGTGTCAGAGACCTGCGCGCTACTTGTCGCAGAAAGGAAAGAACTCTGCCGCCATGCCATCAGATCTTGCTAAGAAGAAGGCTGCCAAGAAGAAGGAGGCCGCTAAAGCTCGACAGCGTGCAAAAAAGCATGACGAGGTGAACGGAGATGGAGAGCTTCAAGATGACCCAGTGAATGATGCAGAAACTAATGGAGATGCGAATGGAGATGTTGCCGCTTTGTCCAAGGAGCTGGACGAGTTTGAGATGCGTAAGACAGAGGCACGGGCAGTAACAGGTGTTTTGGCTTCCCACCCCAACAGCACAGATGTTCACATCAGCAGTCTGTCTCTCACCTTTCATGGACAAGAGTTACTGAGTGACACGAGCCTGGAGCTCAACTCTGGCAGGCGCTACGGCCTCATTGGTCTCAATGGCACAGGTAAGTCAATGCTGCTGTCTGCCATTGGCCACCGAGAAGTTCCCATCCCAGAACACATTGACATCTTCCATCTGACGCGTGAGATGGCCCCTAGTGAGAAAACGGCGCTGCAGTGTGTTATGGAGGTTGATGAAGAGAGGATAAAGCTTGAGAAGGAGGCTGAGCGACTGGCTCATGAGGATTCAGAGTGTGAAAAGCTGATGGAGATCTATGAGCGTTTAGAGGAGTTGGACGCAGACAAAGCTGAAGTTCGAGCTTCACGAATCCTCTTTGGACTCGGTTTCACCCCTGCTATGCAGCGAAAGAAACTGAAAGACTTCagtggaggctggagaatgcgtGTGTCACTTGCCAGAGCCCTTTTCATAAAGCCCTTCATGCTGTTGTTAGATGAACCCACTAACCACCTGGATCTGGATGCCTGTGTGTGGCTAGAAGAAGAACTGAAGTCttttaaGCGAATTCTTGTACTCATCTCACATTCTCAAGACTTTCTCAATGGTGTGTGCACAAACATCATTCATCTCCACCAGAGGAAGCTCAAGTACTACACTGGGAACTATGACCAGTATGTAAAGACCagggaggagctggaggaaaacCAGATGAAGCGGTACAACTGGGAGCAGGACCAGATAGCTCACATGAAGAATTATATTGCCCGTTTTGGTCATGGTTCTGCAAAGCTAGCTCGCCAAGCTCAAAGCAAAGAAAAAACACTGCAGAAAATGGTAGCCTCTGGCCTAACAGCTCGAGTGATGAATGATAAGactttgtcattttattttcctCCTTGTGGGACAATTCCTCCTCCTGTCATCATGGTGCAGAATGTCAGCTTCAGATACTCCAGTGACACCcAAATTATTTATAAGAACTTGGAGTTTGGCATTGACTTGGACACACGGGTTGCACTTGTTGGTCCCAATGGGGCGGGGAAGTCCACACTTCTCAAGCTGCTGATGGGAGAGCTTCTCCCTACAGATGGAATGATAAGGAAACACTCACATGTCAAGATTGGCAGGTATCACCAGCATCTGACTGAGCAGCTGGAGCTCGATCTGTCTCCTCTGGAGTACATGATGAAGTGCTTCCCAGAAATCAAAGAGAAGGAGGAGATGAGGAAGATCATTGGATGTTATGGCCTGACAGGGAAGCAGCAGGTCAGTCCCATCAGGAACTTGTCTGATGGCCAGAAGTGCCGGGTGTGTTTCGCCTGGCTAGCATGGCAGAATCCACACATGCTGTTTCTGGATGAGCCAACCAATCACTTGGACATAGAGACTATTGATGCACTGGCTGAGGCCATCAATGAATTTGAGGGAGGAATGATGCTGGTTAGCCACGACTTCAGACTTATTCAGCAGGTGGCTCAGGAAATTTGGGTCTGTGAAAAGCAAACCATCACCAAGTGGAAAGGAGACATTTTAGCTTACAAAGAGCACTTGAAATCAAAAATTGACAAACAGACTCACGATATATAAAGATTGGAAAAAGAATTACCAAGGACTGACTTTCCTCCTATTTCCCAAAGGTGCTTGACCGAAGGATCATTGAGAACTTCTCAAGAGCAATTGTTCTCTGGTTATATCTTCTAACGCATCTCTTAGATTTCCCAGCATCAGAgcgtctgttttcttttaatattgtAAAGGCAATAATGGTTCACTGAAACAAATGCAGAACATCATAATAACATCAGCATTATCATTCAGGAAAAAACTCTAATTATGCAACATCAACTCTTAACATCAGCATCCCTACCAAAACAATGAAtagaaacacaaaatattttacacCAAACAGTGTGATCTTAATGTCAGTAATGCATTCATGTGAATATATGTCCACATTCCTGTTACTTCctcatttttttaatgcaagatGAGCTGGGGTATTTAatactatttaataatatttaggtGAAACTGGTCAGGAATGCTCTTCCAATCTCAACCCAGCGTTGAGAGTACAacccccagtgctgggaaacacccacacactctatTCACATACTAtaggcaatttagcttatccagttcacctatatcacatgtctttggactgtggatgaAACCAGAACACCCcaaggaaacacacacaaacatgagggGAACATGCACACTTCACACAGAAAGGCctcctggcccagctgggactcaaaccagcggccttcttgctgtgaggtgacagtgctaaccacttagtcAACATGCTGCCCGTACACTGAGACATTTTAAGAAATCCCATGctcgtcatctgatggtcaactatcgctgtagcaactgagatagtagcctgcttttttttctttatcttaaatgtttggtgattgtttgtactgtgttgatggatgagatgtttgtctgtttttatgttctgcagagcaggaacctgctgaaaaacagcattcatgctgagtcaggcccgattatcttttaatcttttcctgtttaaaaataaaaaataaataaataaaaaa
>TCONS_00068036
AGACAGAGGCACGGGCAGTAACAGGTGTTTTGGCTTCCCACCCCAACAGCACAGATGTTCACATCAGCAGTCTGTCTCTCACCTTTCATGGACAAGAGTTACTGAGTGACACGAGCCTGGAGCTCAACTCTGGCAGGCGCTACGGCCTCATTGGTCTCAATGGCACAGgtgctccggtttcccccgcagtcccgCAGAGACATGCACTATAAATGAATTgcattaactaaattggccgtagtgtatgagagtatAGTGGAAGAGTGGATAGTGAGAGTGGAAGAGCAttcgctacataaaacatatgccggaatagctgacggttcatcctgctgtggcgactcctgataaatttAGGACTAAGCCGGAGGAACATAAATGAAGGAAGTAATACaaaaaatgttattgcactaatCCAAATCCAGACCTCATCCTGACTGAAATGCTGTGGTGAGAGCTCTGGAGAAACTCCAAAACTCTTCCAGCTAAACTGAGTCTACAGTCATCTGCATTATAGAGTGTCCTGTTTGTCATCCATG

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-050506-58 Predicted to enable ATP binding activity. Orthologous to human ABCF2 (ATP binding cassette subfamily F member 2).

Ensembl:

ensembl_id ENSDARG00000052331 ENSDARG00000105779

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00068033 False 475 mRNA 0.36 3 41401488 41403022
TCONS_00069277 False 2269 lncRNA 0.32 1 41401488 41403756
TCONS_00068034 False 665 lncRNA 0.33 2 41401491 41402246
TCONS_00068035 False 3025 mRNA 0.45 15 41403690 41420226
TCONS_00068036 True 539 processed_transcript 0.47 2 41414590 41416307

Neighbor

gene id symbol gene type direction distance location
XLOC_034981 prkdc coding downstream 4628 41348543 ~ 41396860 (-)
XLOC_034980 ncf2 coding downstream 62565 41329748 ~ 41338923 (-)
XLOC_034979 kif9 coding downstream 105977 41275201 ~ 41295511 (-)
XLOC_034978 htr5ab coding downstream 298990 41080649 ~ 41102498 (-)
XLOC_034977 insig1 coding downstream 386715 41007773 ~ 41014773 (-)
XLOC_034983 smarcd3b coding upstream 16262 41436488 ~ 41489997 (-)
XLOC_034984 NFX1 coding upstream 71267 41491493 ~ 41512999 (-)
XLOC_034985 BX005319.3 coding upstream 72791 41493017 ~ 41493131 (-)
XLOC_034986 plxdc2 coding upstream 96947 41517173 ~ 41627956 (-)
XLOC_034987 malrd1 coding upstream 212702 41632928 ~ 41693004 (-)
XLOC_034975 CU041319.2 non-coding downstream 452298 40948875 ~ 40949190 (-)
XLOC_034973 CU041319.3 non-coding downstream 516783 40866815 ~ 40884705 (-)
XLOC_034969 NA non-coding downstream 839787 40557036 ~ 40561701 (-)
XLOC_034962 BX908792.1 non-coding downstream 1685415 39715712 ~ 39716073 (-)
XLOC_034958 BX842701.1 non-coding downstream 1960438 39437384 ~ 39441050 (-)
XLOC_034988 NA non-coding upstream 287314 41707540 ~ 41709193 (-)
XLOC_034995 NA non-coding upstream 558162 41978388 ~ 41980012 (-)
XLOC_034997 CR759753.1 non-coding upstream 733184 42153410 ~ 42153524 (-)
XLOC_034998 CR847539.1 non-coding upstream 870752 42290978 ~ 42291094 (-)

Expression


Co-expression Network