G1648520


Basic Information

Item Value
gene id G1648520
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 64745742 ~ 64746267 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1886428
agagtaacagagagagagaggatgacagtaagagagagaggatgacagtcaaagagagagagaggatgacagtaaacgagagagaggatgacagtaagagagagaggatgacagtaaaagagagagtgaggatgacagtaaaagagagagagaggatgacagtaaaagagagagaagatgacagtaaaagagagagagaggatgacagtaaaagagagagagagagga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1886428 True 228 lncRNA 0.43 2 64745742 64746267

Neighbor

gene id symbol gene type direction distance location
LOC118941527 ERH coding upstream 192828 64540285 ~ 64552914 (+)
LOC118941371 NA coding upstream 263479 64481427 ~ 64482263 (+)
LOC118941526 NA coding upstream 525173 64215286 ~ 64220569 (+)
LOC118941525 NA coding upstream 530125 64202220 ~ 64215617 (+)
ccdc177 LOC106586969 coding upstream 544008 64193509 ~ 64201734 (+)
LOC110498417 capn3 coding downstream 224968 64971235 ~ 65020599 (+)
wdr32 dcaf10 coding downstream 299144 65045411 ~ 65070228 (+)
LOC110498306 LOC106563190 coding downstream 331113 65077380 ~ 65103465 (+)
manba manba coding downstream 362418 65108685 ~ 65142820 (+)
nat8 LOC106607815 coding downstream 483417 65229684 ~ 65239437 (+)
G1648495 NA non-coding upstream 48175 64696971 ~ 64697567 (+)
G1648489 NA non-coding upstream 61107 64682691 ~ 64684635 (+)
G1648487 NA non-coding upstream 66260 64679133 ~ 64679482 (+)
G1648484 NA non-coding upstream 70621 64674085 ~ 64675121 (+)
G1648468 NA non-coding upstream 137901 64606005 ~ 64607841 (+)
G1648523 NA non-coding downstream 1183 64747450 ~ 64749771 (+)
G1648542 NA non-coding downstream 73042 64819309 ~ 64819775 (+)
G1648551 NA non-coding downstream 100971 64847238 ~ 65013404 (+)
G1648562 NA non-coding downstream 128864 64875131 ~ 64876017 (+)
G1648569 NA non-coding downstream 142791 64889058 ~ 64889828 (+)
G1648296 NA other upstream 616674 64128208 ~ 64129068 (+)
LOC110498409 LOC106592792 other upstream 1353910 63380908 ~ 63414582 (+)
G1647477 NA other upstream 1541685 63202756 ~ 63204057 (+)
G1647411 NA other upstream 1668599 63075149 ~ 63077143 (+)
G1647342 NA other upstream 1727054 63016955 ~ 63018688 (+)
G1648608 NA other downstream 234097 64980364 ~ 64980943 (+)
G1649268 NA other downstream 715506 65461773 ~ 65463454 (+)
G1649291 NA other downstream 798110 65544377 ~ 65545055 (+)
G1649309 NA other downstream 832172 65578439 ~ 65582582 (+)
G1649319 NA other downstream 854693 65600960 ~ 65602416 (+)

Expression


Co-expression Network