LOC118941525


Basic Information

Item Value
gene id LOC118941525
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 64202220 ~ 64215617 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036955383.1
tgatgTATCATCATAATGGtgtctgattggtggtcatcatttggtgtgtcatcatagtgctctctgattggtggtcatcatttggtgtgtcatcatagtgctcTCTGACTGCTAACAGCCTCCTAACTAGCTTCAATGCTGCACAGCTTTAAAACGTTTGTCTCTCATGAGGAATGGTGTCTCCTGTCCTATGATGACCCTTTCCTCTTTACACCTCACCCATTTATTTGGTGAAATCAGAAGCATTCCTTTGTATGGTTTAGACATATTATCTTAAAGCCAAAAGTACACTTTATAATATGCAAATCAATGAAGAAGACAAATAAGTAAAATAAAATAGTGAATGCAGGTTGACTTGGACAAAGATCTGCTCTTGTGGATTATAAACTAACAGTTTGGGACATAATATATTATGTGGATCAGAGTGTTCCACCTAGTAACACAGCCCCTTCCATGCTCCCTCTTTATCAGATCTACCCAACTGAGAGCTGTGCTGTTGGAATGAAAAGAACCATTGTTGCCCCGGGAAGCACAACTCCATGACAACTAGCCACATTGGCTGCTTTTAACAgagcccttctctctctgtagggggagagagaatcaGATAGAAAGGGGGAAAGGGAAGCGCAAGTGAGTGGTCTGAGAGCCCTAAAGCAGACCAGGGACTCTTTTGTGTGTTGCGATGCAGATGGAGAAACTGTGtgttgtacactcttagaaaaaaaggtgctatctagaatctacaagggttcttcggctgtccccataggagaaccctttgaagaaccctttccagagagggttctacatggaatccaaaaaATAGTTTTTACCCggaaccgaaaagggttctaactggaatCAAAAAGAGTTATCCTATGGTGGCAGCCAAATAACCATTTTGGAAGTctttttttctaagtgtgtagTGTATACTGTACTTGTGCTGTTTCTGAGCCCTTGGCTGtactctcctcctgtcttcaccGTACGGCCGAGCCGACCGATCAACCGCTGACGAAGCAGCTGTGGCAGAGCAACGTGACATCACTCAGAGTGATGTCAGcacaacacaacccagccagcTGCTGATGAGGCATCAGAGAGAACCCTGATTCTACTGCAGTATAGAATCTACCTGGCCCCTGATTCTACTGTAGAATATAATCTACCTGGCCCCTGATTCTACTGTAGAATATAATCTACCTGGCCCCTGATTCTACTGTAGAATATAATCTACCTGGCCCCTGATTCTACTGTAGAATATAATCTACCTGGCCCCTGATTCTACTGTAGAATATAATCCACCTGGCCCCTGATTCTACTGTAGCATATAATCTACCTGGCCCCTGATTCTACTGTAGAATATAATCTACCTGGCCCCTGATTCTACTGTAGAATATAATCTACCTGGAACCTGATTCTACTGTAGAGGTGTTCTATAGTATAAAGACCGGTATGTTCTACAAACACTCCTGGACTGTCCTCCAGGATCCTATGCCTGTCTCTCCTCATGTCATATAACAGGAAACATCAGAGCCTTGGTTGTGCAGTGGAGTATAGTATAGAATCTACACCTTCCTAGTTTTGCTGCAGAGGTTTTCTATACCCTCCTAGACACTCTCTCCTGTTCCACCCCCTCTGCTGCTATTATGGATTCTATACCCTCCTGGTTCTGCAGTGGAGGACATTCTATACCCCCCATGGTTCTGCAGTGGAGGACATTCTATACCCTCCTGGTTATGCAGTGAAGGACATTCTATACCCTCCTGGTTCTGCAGTGGAGGACATTCTATACCCTCCTGGTTCTGCAGTGGAGGACATTCTATACCCTCCTGGTTCTGCATTGGACGACAATCTAGACCCCCTGGCTATGCAGTGGAGGACATTCTATACCCTCCTGGTTCTGCAGTGGAGGACATTCTATACCCTTCTGGGTTTTCCGTTTGGAGGACAATCTAGACCCCACTGGTTATGCAGTGGAGGACATTCTATACCCTCCTGGTTCTGCAGTGGAGGACATTCAATACCCCCCCATGGTTCTGCAGTGGAGGACATTCTATACCCTCCTGGTTCTGCAGTGGAGGACATTCTATACCCCCCTGGTTATGCAGTGGAGGACATTCTATACCCCCTATGGTTCTGCAGTGGAGGACATTCTATACCCCCTATGGTTCTGCAGTGGAGGACATTCTATACCCCCCCATGGTTCTGCAGTGGAGGACATTCTATACCCTCCTGGTTCTGCAGTGGAGGACATTCTATACCCCCCTGGTTATGCAGTGGAGGACATTCTATACCCCCTATGGTTCTGCAGTGGAGGACATTCTATACCCCCTATGATTCTGCAGTGGAGGACATTCTATACCCCCCCATGGTTCTGCAGTGGAGGACATTCTATACCCTCCTGGTTCTGCAGTGGAGGACATTCTATACCCCCCTGGTTATGCAGTGGAGGACATTCTATACCCCCTATGGTTCTGCAGTGGAGGACATTCTATACCCCCTATGGTTCTGCAGTGGAGGACATTCTATACCCTCCTGGTTATGCAGTGGAGGACATTCTATACCCTCCTGGTTCTGCAGTGGAGGACATTCTATACCCTCCTGGTTCTGCAGTGGAGGACATTCTATACCCTCCTGGTTCTGCATTGGACGACAATCTAGACCCCCTGGTTATGCAGTGGAGGACATTCTATACCCTCCTGGTTCTGCAGTGGAGGACATTCTATACCCTTCTGGGTTTTCCGTTTGGAGGACATTCTATACCCTCCTGGTTCTGCAGTGGAGGACATTCTATACCCCCCCATGGTTCTGCAGTGGAGGACATTCTATACCCCCTATGGTTCTGCAGTGGAGGACATTCTATACCCCCTATGGTTCTGCAGTGGAGGACATTCTATACCCTCCTGGTTCTGCAGTGGAGGACATTCTATACCATAGAGATTAGATATCGCTATGTTTTATACCCTCCTGGTTCTGCAGTGGAGGACATTCTATACCCTCCTGGTTCTGCAGTGGAGGACATTCTATACCCTTCTGGGTTTTCCGTTTGGAGGACATTCTATACCCTCCTGGTTCTGCAGTGGAGGACATTCTATACCCTCCTGGTTCTGCAGTGGAGGACATTCTATACCCCCCTGGTTATGCAGTGGAGGACATTCTATACCCCCTATGGTTCTGCAGTGGAGGACATTCTATACCCCCTATGGTTCTGCAGTGGAGGACATTCTATACCCTCCTGGTTCTGCAGTGGAGGACATTCTATACCCTCCTGGTTCTGCAGTGGAGGACATTCTATACCATAGAGATTAGATATCGCTATGTTTTATACCCTCCTAGACCCTTCCTCCAGTCTCTGCTCCAGTCTCTGCTCCAGTCTCTGCTCCAGTCTCTGCTCCAGTCTCTGCTCCAGTCTCTGCTCCAGTCTCTGCTCCAGTCTCTGCTTCAGTCTCTGCTTCAGTCTCTGCTCCAGTCTCTGCTCCAGTCTCTGCTCCAGTCTCTGCTCCAGTCTCTGCTCCAGTCTCTCCTCCTGGACCTTCCTCATGTCACGTGACTTAACAGGAAAGTGCTGTGTTCTAGCCAGAGACCATCGGACCCCAAATCCCCACCTTCTATCCCCGGCATCCATCCAGTTTGCCTCTCTGTGCGAAGTTTAACAGATCATGGCAAGGATGAAAGGGCGATGACGTTCTCCACCTACCTAgtgcccccacctccacctctacctaccACACCCTACAGAACACATCTATTGCCAAAAGAACCTACTAGTCTGTGTCCTACAGAACACTACAGCCACGCCTACAGCCAATAGAACTCTGCCTTCTACCATGATGCCCTGGAGAACTGTCCTGAATGTCCTACAGAACACTGACCTACAGAACACTGACCTACAGAACACTGTCCTACAGAACACTGTCCTACAGAACACTGACCTACAGAACACTGTCCTACAGAACACTGTCCTACAGAACACTGTCCTACAGAACACTGTCCTACAGAACGCCGACCTACAGAACACCGACCTACAAAACGCCGACCTACAGAACACCGATCTACAGAACACCGACCTACAGAACGCCGACCTACAGAACGCCGACCTACAGAACGCCGACCTACAGAACGCCGAC

Function

NR:

description
putative keratin-associated protein 10-like ENSP00000375147

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036955383.1 True 4136 mRNA 0.48 3 64202220 64215617

Neighbor

gene id symbol gene type direction distance location
ccdc177 LOC106586969 coding upstream 486 64193509 ~ 64201734 (+)
LOC110514319 rbm25 coding upstream 483210 63648369 ~ 63719010 (+)
plek2 plek2 coding upstream 636736 63557803 ~ 63565484 (+)
LOC110498294 LOC106599381 coding upstream 667517 63506786 ~ 63534703 (+)
fbln5 fbln5 coding upstream 702048 63435324 ~ 63500172 (+)
LOC118941371 NA coding downstream 265810 64481427 ~ 64482263 (+)
LOC118941527 ERH coding downstream 324668 64540285 ~ 64552914 (+)
LOC110498417 capn3 coding downstream 755618 64971235 ~ 65020599 (+)
wdr32 dcaf10 coding downstream 829794 65045411 ~ 65070228 (+)
LOC110498306 LOC106563190 coding downstream 861763 65077380 ~ 65103465 (+)
G1648317 NA non-coding upstream 30113 64163014 ~ 64172107 (+)
G1648303 NA non-coding upstream 60540 64140677 ~ 64141680 (+)
G1648301 NA non-coding upstream 63068 64138626 ~ 64139152 (+)
G1648295 NA non-coding upstream 72793 64127711 ~ 64129427 (+)
G1648281 NA non-coding upstream 112779 64088617 ~ 64089441 (+)
G1648310 LOC106591369 non-coding downstream 33192 64248809 ~ 64250993 (+)
G1648343 NA non-coding downstream 37697 64253314 ~ 64254436 (+)
G1648336 NA non-coding downstream 62355 64277972 ~ 64279689 (+)
G1648376 NA non-coding downstream 104038 64319655 ~ 64320402 (+)
G1648378 NA non-coding downstream 109010 64324627 ~ 64327384 (+)
G1648296 NA other upstream 73152 64128208 ~ 64129068 (+)
LOC110498409 LOC106592792 other upstream 810388 63380908 ~ 63414582 (+)
G1647477 NA other upstream 998163 63202756 ~ 63204057 (+)
G1647411 NA other upstream 1125077 63075149 ~ 63077143 (+)
G1647342 NA other upstream 1183532 63016955 ~ 63018688 (+)
G1648608 NA other downstream 764747 64980364 ~ 64980943 (+)
G1649268 NA other downstream 1246156 65461773 ~ 65463454 (+)
G1649291 NA other downstream 1328760 65544377 ~ 65545055 (+)
G1649309 NA other downstream 1362822 65578439 ~ 65582582 (+)
G1649319 NA other downstream 1385343 65600960 ~ 65602416 (+)

Expression


Co-expression Network