G1647342


Basic Information

Item Value
gene id G1647342
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 63016955 ~ 63018688 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1884898
gagaggacaggagagagagatgagaggacaggagagagagatgagaggacaggatagagagatgagaggacaggagagagagatgagaggacaggacaggagaaagagaggacaggatagagagatgagaggacaggatagagagatgagaggacaggagagagagatgagaggacaggagagagagatgagaggacaggagagagagatgagaggacaggagagagagatgagaggacaggagagagagatgagaggacaggatagagagatgagaggacaggagagagagatgagaggacaggacaggagaaagagaggacaggatagagagatgagaggacaggatagagagatgagaggacaggagagagagatgagaggacaggagagagagatgagaggacaggagagagagatgagaggacaggagagagagatgagaggacaggatagagagatgagaggacaggatagagagatgagaggacaggacaggagaaagagaggacaggatagagagatgagaggacaggagagagagatgagaggacaggacaggagaaagagaggacaggatagagagatgagaggacaggagagatagatgagaggacaggacaggagaaagagaggacaggatagagagatgagaggacaggacaggagaaagagaggacaggagagagagatgagaggacaggacaggatagatagatgagaggacaggagagagagatgagaggacaggacaggagaaagagaggacaggatagagagatgagaggacaggatagagagatgagaggacatgagagagagatgagaggacaggatagagagatgagaggacaggatagagagatgagaggacaggagagagagatgagaggacaggagaaagagaggacaggagagagagatgagaggacaggagagagagatgagaggacaggatagagagatgagaggacaggatagagagatgagaggagaggagaaagagaggacaggatagagagatgagagcacaggagaaagagaggacaggatagagagatgagagaagagaggacaagatagagggatgagagaagagagggcaggatagagggatgagagaagagaagacaggatagagggatgagagaagaggacaggatagagagatgagatgagagga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1884898 True 1183 TUCP 0.50 2 63016955 63018688

Neighbor

gene id symbol gene type direction distance location
LOC110512290 LOC106600942 coding upstream 244999 62655733 ~ 62771956 (+)
LOC110504278 LOC102780996 coding upstream 378829 62604904 ~ 62638126 (+)
LOC110504279 LOC106599953 coding upstream 414181 62500076 ~ 62602774 (+)
srsf5a LOC106611464 coding upstream 523317 62486921 ~ 62493719 (+)
LOC110504280 LOC106602928 coding upstream 531508 62466254 ~ 62485447 (+)
map3k9 map3k9 coding downstream 32129 63050817 ~ 63103044 (+)
med6 med6 coding downstream 122735 63141423 ~ 63152629 (+)
pcnx1 pcnx1 coding downstream 134665 63153353 ~ 63232158 (+)
LOC110498282 NA coding downstream 229934 63248622 ~ 63287372 (+)
LOC110498284 chp1 coding downstream 273881 63292569 ~ 63309243 (+)
G1647349 NA non-coding upstream 85952 62930573 ~ 62931003 (+)
G1647335 NA non-coding upstream 103962 62912566 ~ 62912993 (+)
G1647330 NA non-coding upstream 108638 62907012 ~ 62908317 (+)
G1647325 NA non-coding upstream 119673 62897063 ~ 62897282 (+)
G1647323 NA non-coding upstream 124374 62890057 ~ 62892581 (+)
LOC100136022 NA non-coding downstream 22118 62885583 ~ 63042917 (+)
G1647397 NA non-coding downstream 29538 63048226 ~ 63048719 (+)
G1647411 NA non-coding downstream 56461 63075149 ~ 63077143 (+)
G1647437 NA non-coding downstream 96391 63115079 ~ 63115647 (+)
G1647431 NA non-coding downstream 97069 63115757 ~ 63116831 (+)
G1646509 NA other upstream 871665 62144183 ~ 62145290 (+)
G1646294 NA other upstream 1455871 61558041 ~ 61561084 (+)
G1646225 NA other upstream 1671801 61344787 ~ 61345154 (+)
LOC110498404 LOC105025554 other upstream 1725114 61242422 ~ 61308910 (+)
G1647477 NA other downstream 184068 63202756 ~ 63204057 (+)
LOC110498409 LOC106592792 other downstream 372937 63380908 ~ 63414582 (+)
G1648296 NA other downstream 1109520 64128208 ~ 64129068 (+)
G1648608 NA other downstream 1961676 64980364 ~ 64980943 (+)

Expression


Co-expression Network