G1648317


Basic Information

Item Value
gene id G1648317
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 64163014 ~ 64172107 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1886160
ggacagaacaggacaggacagaacaggacaggatagagcagaacaggacagagcaggataggacaggaccgaacagaacaggacaggacagaacagggcagggcagaacaggacagagcagaacagaacagaacaagacaggacagaaaaggacaggacagaacaggacaggacagagctgaacagaacaggacagagcagaacagagcagaacaggacagagcaggacaggacaggacaggacagagcaggacaggacaggacaggacagagc

Function

NR:

description
PREDICTED: uncharacterized protein LOC106598485, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1886160 True 274 lncRNA 0.54 2 64163014 64172107

Neighbor

gene id symbol gene type direction distance location
LOC110514319 rbm25 coding upstream 444004 63648369 ~ 63719010 (+)
plek2 plek2 coding upstream 597530 63557803 ~ 63565484 (+)
LOC110498294 LOC106599381 coding upstream 628311 63506786 ~ 63534703 (+)
fbln5 fbln5 coding upstream 662842 63435324 ~ 63500172 (+)
LOC110498409 LOC106592792 coding upstream 748432 63380908 ~ 63414582 (+)
ccdc177 LOC106586969 coding downstream 21402 64193509 ~ 64201734 (+)
LOC118941525 NA coding downstream 30113 64202220 ~ 64215617 (+)
LOC118941526 NA coding downstream 43179 64215286 ~ 64220569 (+)
LOC118941371 NA coding downstream 309320 64481427 ~ 64482263 (+)
LOC118941527 ERH coding downstream 368178 64540285 ~ 64552914 (+)
G1648303 NA non-coding upstream 21334 64140677 ~ 64141680 (+)
G1648301 NA non-coding upstream 23862 64138626 ~ 64139152 (+)
G1648295 NA non-coding upstream 33587 64127711 ~ 64129427 (+)
G1648281 NA non-coding upstream 73573 64088617 ~ 64089441 (+)
G1648261 NA non-coding upstream 109283 64053140 ~ 64053731 (+)
G1648310 LOC106591369 non-coding downstream 76702 64248809 ~ 64250993 (+)
G1648343 NA non-coding downstream 81207 64253314 ~ 64254436 (+)
G1648336 NA non-coding downstream 105865 64277972 ~ 64279689 (+)
G1648376 NA non-coding downstream 147548 64319655 ~ 64320402 (+)
G1648378 NA non-coding downstream 152520 64324627 ~ 64327384 (+)
G1648296 NA other upstream 33946 64128208 ~ 64129068 (+)
G1647477 NA other upstream 958957 63202756 ~ 63204057 (+)
G1647411 NA other upstream 1085871 63075149 ~ 63077143 (+)
G1647342 NA other upstream 1144326 63016955 ~ 63018688 (+)
G1648608 NA other downstream 808257 64980364 ~ 64980943 (+)
G1649268 NA other downstream 1289666 65461773 ~ 65463454 (+)
G1649291 NA other downstream 1372270 65544377 ~ 65545055 (+)
G1649309 NA other downstream 1406332 65578439 ~ 65582582 (+)
G1649319 NA other downstream 1428853 65600960 ~ 65602416 (+)

Expression


Co-expression Network