G1648261


Basic Information

Item Value
gene id G1648261
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 64053140 ~ 64053731 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1886086
CTGGCAGTAGTGTCACAGACACCAGACTATATTAGCTGATCTGGCAGGAGTGTTATAGAGAGACCAGAATATATTAGCTGATCTGGCAGTAGTATTATAGAGACCAGAATATATTAGCTGATCTGACAGTAGTGTTATAGACACCAGAATATATTAGCTGATCTGGATGTAGACACAGGGAGAACAGAAGATATTAGATGATCTGGTAGTAGTGACACAGACACCAGAATATATTAGCTGATCTGGCAGTAATATCATAGGGAGACCAGAATATATTAGCTGATCTGGCAGTATTATCATAGAAACCAGAATATATTAGCTGATCTGGAGTATTATCATAGAAACCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1886086 True 348 lncRNA 0.38 3 64053140 64053731

Neighbor

gene id symbol gene type direction distance location
LOC110514319 rbm25 coding upstream 334130 63648369 ~ 63719010 (+)
plek2 plek2 coding upstream 487656 63557803 ~ 63565484 (+)
LOC110498294 LOC106599381 coding upstream 518437 63506786 ~ 63534703 (+)
fbln5 fbln5 coding upstream 552968 63435324 ~ 63500172 (+)
LOC110498409 LOC106592792 coding upstream 638558 63380908 ~ 63414582 (+)
ccdc177 LOC106586969 coding downstream 139778 64193509 ~ 64201734 (+)
LOC118941525 NA coding downstream 148489 64202220 ~ 64215617 (+)
LOC118941526 NA coding downstream 161555 64215286 ~ 64220569 (+)
LOC118941371 NA coding downstream 427696 64481427 ~ 64482263 (+)
LOC118941527 ERH coding downstream 486554 64540285 ~ 64552914 (+)
G1648253 NA non-coding upstream 14603 64038057 ~ 64038537 (+)
G1648245 NA non-coding upstream 30483 64021480 ~ 64022657 (+)
G1648230 smoc1 non-coding upstream 33266 63973979 ~ 64019874 (+)
G1648221 NA non-coding upstream 94281 63958620 ~ 63958859 (+)
G1648174 NA non-coding upstream 137941 63914566 ~ 63915199 (+)
G1648281 NA non-coding downstream 34886 64088617 ~ 64089441 (+)
G1648295 NA non-coding downstream 73980 64127711 ~ 64129427 (+)
G1648301 NA non-coding downstream 84895 64138626 ~ 64139152 (+)
G1648303 NA non-coding downstream 86946 64140677 ~ 64141680 (+)
G1648317 NA non-coding downstream 109283 64163014 ~ 64172107 (+)
G1647477 NA other upstream 849083 63202756 ~ 63204057 (+)
G1647411 NA other upstream 975997 63075149 ~ 63077143 (+)
G1647342 NA other upstream 1034452 63016955 ~ 63018688 (+)
srsf5a LOC106611464 other upstream 1559421 62486921 ~ 62493719 (+)
G1648296 NA other downstream 74477 64128208 ~ 64129068 (+)
G1648608 NA other downstream 926633 64980364 ~ 64980943 (+)
G1649268 NA other downstream 1408042 65461773 ~ 65463454 (+)
G1649291 NA other downstream 1490646 65544377 ~ 65545055 (+)
G1649309 NA other downstream 1524708 65578439 ~ 65582582 (+)

Expression


Co-expression Network