G1648253


Basic Information

Item Value
gene id G1648253
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 64038057 ~ 64038537 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1886076
TGGAGCGTGACTGTGTTCTAAAACAGAATGTTTGGAGGGTGACTGTGTTCTAAAACAGAGTGTTTGGAGCGTGACTGTGTTCTAAAACAGAATGTTTGGAGCGTGATTGTGTTCTAAAACAGAGTGTTTGGAGCGTGACTGTGTTCTAAAACAGAGTGTTTGGAGCGTGACTGTGTTCTAAAACAGAGTGTTTGGAGCGTGACTGTGTTCTAAAACAAAATGTTTGGAGCGTGACTGTGTTCTAAAACAGAATGTTTGGAGAGTGACTGTGTTCTGGCTGCTGATACATCATAGGTTCTTCTAGCGAGGGAAACTGTAAAGGTTACTACGACGACACACACAGTGCACTGTAAAGGTTACTACGACGACACACACAGTGCACTGTAAAGGTTACTACGACGACACACACAGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1886076 True 413 lncRNA 0.44 2 64038057 64038537

Neighbor

gene id symbol gene type direction distance location
LOC110514319 rbm25 coding upstream 319047 63648369 ~ 63719010 (+)
plek2 plek2 coding upstream 472573 63557803 ~ 63565484 (+)
LOC110498294 LOC106599381 coding upstream 503354 63506786 ~ 63534703 (+)
fbln5 fbln5 coding upstream 537885 63435324 ~ 63500172 (+)
LOC110498409 LOC106592792 coding upstream 623475 63380908 ~ 63414582 (+)
ccdc177 LOC106586969 coding downstream 154972 64193509 ~ 64201734 (+)
LOC118941525 NA coding downstream 163683 64202220 ~ 64215617 (+)
LOC118941526 NA coding downstream 176749 64215286 ~ 64220569 (+)
LOC118941371 NA coding downstream 442890 64481427 ~ 64482263 (+)
LOC118941527 ERH coding downstream 501748 64540285 ~ 64552914 (+)
G1648245 NA non-coding upstream 15400 64021480 ~ 64022657 (+)
G1648230 smoc1 non-coding upstream 18183 63973979 ~ 64019874 (+)
G1648221 NA non-coding upstream 79198 63958620 ~ 63958859 (+)
G1648174 NA non-coding upstream 122858 63914566 ~ 63915199 (+)
G1648170 NA non-coding upstream 127857 63909603 ~ 63910200 (+)
G1648261 NA non-coding downstream 14603 64053140 ~ 64053731 (+)
G1648281 NA non-coding downstream 50080 64088617 ~ 64089441 (+)
G1648295 NA non-coding downstream 89174 64127711 ~ 64129427 (+)
G1648301 NA non-coding downstream 100089 64138626 ~ 64139152 (+)
G1648303 NA non-coding downstream 102140 64140677 ~ 64141680 (+)
G1647477 NA other upstream 834000 63202756 ~ 63204057 (+)
G1647411 NA other upstream 960914 63075149 ~ 63077143 (+)
G1647342 NA other upstream 1019369 63016955 ~ 63018688 (+)
srsf5a LOC106611464 other upstream 1544338 62486921 ~ 62493719 (+)
G1648296 NA other downstream 89671 64128208 ~ 64129068 (+)
G1648608 NA other downstream 941827 64980364 ~ 64980943 (+)
G1649268 NA other downstream 1423236 65461773 ~ 65463454 (+)
G1649291 NA other downstream 1505840 65544377 ~ 65545055 (+)
G1649309 NA other downstream 1539902 65578439 ~ 65582582 (+)

Expression


Co-expression Network