XLOC_035989


Basic Information

Item Value
gene id XLOC_035989
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 48017651 ~ 48018967 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00072279
gtccaaagtgacagAAGCGAGAACAACTTTTATAATGCAGCATAATATCTGCACTGCATCAATACGAAAAAGACATTTTATACCTAAATTGAACCATGTTGCTATACTGGAATTATTTTACGCCTGGTGTtgacttaatttgtaaattgtgttTGAGTTGGTGCTAAACGAAACCCCGCCTCTAAACCTAAACATCATTGAGGggtgagcaaattgtactaaactacgaatttatacgaattagccactaaatccaaaaagttacgaattgtcgtgagatcgTGTTGGTTTGgccaatgagttttttttttttttgtgaactttgaTTCGAGAAGCTAAGGTAATGCAGCTTTATATCTGCACTGCATCGATACGAAAAATACTTTATACTTAAATTAAAGTGAACCATGTTGCTATACTGGAATTTTTAACGCATATCTCTGatgttaacttaatttgtaaactgtgTTTGAGTTG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00072279 True 477 lncRNA 0.34 2 48017651 48018967

Neighbor

gene id symbol gene type direction distance location
XLOC_035988 mfn2 coding upstream 68748 47897734 ~ 47948903 (+)
XLOC_035987 plod1a coding upstream 121834 47850073 ~ 47895817 (+)
XLOC_035986 pimr185 coding upstream 198199 47817454 ~ 47819452 (+)
XLOC_035985 ndufa7 coding upstream 205696 47804284 ~ 47811955 (+)
XLOC_035984 si:ch211-243p7.3 coding upstream 265711 47726919 ~ 47751940 (+)
XLOC_035990 si:ch211-263k4.2 coding downstream 76944 48095911 ~ 48242997 (+)
XLOC_035991 CR381598.1 coding downstream 156341 48175308 ~ 48175423 (+)
XLOC_035992 NA coding downstream 368605 48387572 ~ 48390135 (+)
XLOC_035993 CABZ01070222.1 coding downstream 371595 48390562 ~ 48390678 (+)
XLOC_035994 si:ch211-263k4.2 coding downstream 461562 48480529 ~ 48541957 (+)
XLOC_035979 NA non-coding upstream 757841 47256108 ~ 47259810 (+)
XLOC_035976 CR792439.1 non-coding upstream 858618 47154662 ~ 47159033 (+)
XLOC_035974 BX000472.1 non-coding upstream 945314 47072220 ~ 47072337 (+)
XLOC_035973 BX000472.2 non-coding upstream 957136 47060401 ~ 47060515 (+)
XLOC_035971 FO704898.1 non-coding upstream 1251106 46766429 ~ 46766545 (+)
XLOC_035995 BX649478.1 non-coding downstream 495584 48514551 ~ 48527546 (+)
XLOC_036000 BX323876.1 non-coding downstream 672502 48691469 ~ 48693254 (+)

Expression


Co-expression Network