XLOC_035984 (si:ch211-243p7.3)


Basic Information

Item Value
gene id XLOC_035984
gene name si:ch211-243p7.3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 47726919 ~ 47751940 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00070485
TGCTGTTATAAGTTATAGAGACCTCTTAAGTGGTGTTGCCGGTAATTCGGATCATTTCAAGTGCTCCACCAGATCATCAGCAGGTCACATTACAGACGACAAAAGGAGACCATGAGTGACTCTTCTGTTGAGCTTGAGGGTTGGGTGCGGATGTGGGAAAAACCTGACGGTATTTCACCGGCTGACCTCTCATGGGTGAAGAATGACACAGAGAGAGGGCTCTTCACCCACGTTCAGGTCTATCAGGACAGTACTGGTGTGCTGAAGAGGCGACGGGTGATGAAGTCCAACAGGATGTGGTTTTACCCCCCAGAATCTCCAGGCTACGTCAGCGAGACTGTGCCATCACCACACCTCTTCTTTCGGGGTCGCGTCTTTGTCTGGCGGCCCGTTGGAGTGTGGAGATACTCACTGAGGTGTCCTCGTGGTGAAGAATGTGCTGGTAGTGGAAAAAACCTGCACCTCTATCCGTCAGGATACCACAATAGGGTTTGTCAGATCTGCGATGTCGCCAATTGGTATTCAATGCTGACGGAGGTACTGCGCTGTGGGCCGTGCACCGAGGAAGGGAGGAAGAGTGATGGTGGCGAGGTGGGTCGTTGGTTGGCATGGGATCCTGCAATACTTTGTCAGCTCAGTGAGGCTCACCAAGCCATGTTCCCTGCAATTCTAACTAATGGGCGTGGTGTGGACAAGAGCGTGATACGGCTTCTGCGGGACTGTACCGAGATGCACACCATGATGAAGGTGTGCCGACAGGTTCAAGAAAACCATACGAAGGAGTATCTCCAAAGGAAGGATCTGTACACCACCCTCCTGATGACTCTGAAAAAGCCTGGTGGGATTGTGTCAGCCTTTAAACACAAGTTTGAGGCTCCACCTCCTCAAAAAGAGCTGCCTTCTGCTCGCCTACTTCGCCATGCATTCCTGCTCGCAGAGGCCGGCAATATGCAGGACTACACGAACCAGATTCTGTCCACTTTTGGCACAGTGGTGAAAATGGACTCAAAAAAGGTGTCTGGGGAAGCTGAAGGCTCCGGGGAGTGGTTCACCAGCATTGGCAATGAGCACTCACAAATAGTCTCATTTGTTGTAACGTGTGACGAGTCCACTGAGTGTCTGAAGCCCATGTGTCAGGGAATTATGGACCGGTTCCAGCAGGCCAGTCAACCTGTCCCGAAGATCCTGTATGTTGACCGTGGGTGCTGTTGTGCGCAAGGCCCAACTGCTGTGGAGAATTTGTTCCAGACATGGGTGGACGGTGGTATGGTCATCCGTTTGGACCTTTTCTATTGGATTCATTGCTTTGATGCAGCCATTCGCACAGACAGCCACTCAAAGTACACAGTGTTCAAGTCTGCCCTTGCAGGAGCGGTGCTGGCTTACAACCGTGCAGACTTACAGCTGCTCATCAAGGCTGTCAGAGCTCAGGACCTGAAGGCTTTTGACAGCGTAGCTGATGAAGACATGGTGCGGCTGTATGTTTCGAGAGAGCAGCTGAAGCACCATGTTCGGAGAGTCACTCTTGGGGCTCAGGAGACCTTTCAGCTCATTCAGAGGGCCATAGATGAGCTCAAGGGTCCTGCTGGGATGGACCAGAGTGGAGTCAGTCTCTTTAAATCAACAGAAGCAATAGATGGCGTGTGGGAAGCGCAGCAACGACACCTTGAGTGCATACAGGATCCGCCAGAGATGAGCATGTACAGAGTGGCTGGTACCGCCAACATCAATGGGGTGGACGTTCCATACTATAAGTGTCTCCGTGGAAACAACAGTCTGGAGGGGTTCTATAAATCTCTGCCTCACATGATCCCAGGGTCTCGCTCTACACGCGCTCTCAATGTTGTTGTCTGGTCACCCAAAGAGAGTCCAAGACCACTACTTGTTACTGTAAAGGACTCTTCAAGCCCCCACTGTGCCGCACATCCATTTCATGTGCACCTCATCAGCAGAATCGCTCGCTGGAACTCAGAACAGAGTCCTCACACAGTGTTTGGTGTCAAACACCAAACGCACAGATCCTACTCTGGGCCTCTGATTGAACGTCTCAACACCCGATGCCAGCAGTTGTTTGGAGAAAATGTGGAGGAGAATATCCATGTCCCCGCTGCTGTGACGTCAAACGAGCGGCTCGGTTTGGATTATCTATTCAGCCAAAGCACGGGTGAATCTGGAGGCTTCACCCTCACTGACCTATCAAAGTACGCACCCAGTCCAGAGGAGGAGGTGATTGAGCCAGGCCAGGCTGACCCAGAGGAGGATGACGAGGCATACCAGAGTGACCCAGAGGCAGATCAGGATGTGGTCACCGTTGCTCCAGCACACTTAACTCTAACCACCAATGAAACTACCACTGCTCATCCTCCGGCTTTTGAGGATGCTTGCAGCTCCAACCCTCTTCCAGGATTCCAGCAGCTGGAGAGATTCTGTTCTCTGCTGGCTGACATTGGCCTCTCTGAGACCAAGCTGAGCCTGACGCCGTATCAGAGGAATGGGATAATTGATGCGTGGGATGCTGTGGAAGACCATGACAAGCAGCCGCATAAGTTTCTCCAGCAGTACAGGACCCGCTGGGGCAATACACTGTATTGCAGAAGAAAGAGAGACGATCCTGAAGCAGCCATCAATCCCAAACACTATCCGGACATTCACAACAGACTAATGTACACGCTGGTCAAACTTCTGTGGCTGGGTTTACCTCACAGTGACAGCAGAACAAGAGAACTTGAGAAAACATCCATCCTAGAAACCTATGACAGAATTAAGCACTTCATATTGGTGGAAGATCCGGTTCTGTGTAAAGTGGGTATTCCTCTACCTCAAATTACCTTGAAGACCATATGTGAAGTCATTCGCCATCAAGAGACGCTGATCAACGTGCACCCAACAAGAATGCCATCCTCCATGATATTAAAAACCGAACCGATCTCTCTAGAAGATTCACCTCCAGCACCATCTCAGCCATCAGGTCTTCCTCATGAATCCCCAAAGATGAAGAACCAGCACATTCCCATCAAAGAAGAGACTAAGGTCTTGAAGAAAAGATCAGACGCTGTAGTGCTAGCTCCATTCCACCCTGAATCTCACTTGCCCCATCAGACAAATGTGGCCTTGTCAACCATCCTCAGACCTCTGAATCCCAGAATCCTTTCTACCCACCCTTTTACACAAGTGACTCCAGCCTCTGACAGGACACATGTGACTAAATCATCCAGCCAGCCTGATTCCCATCCATCCTGGTCCCGAGCCACTATTTACAAAAGGAAACACAAAGACACGCTAACTCAAGTTGGAGCCAAGCAATCTCGTGTTCACAACTTGCCCATTTGCACACTTTGCCAGAAGCCTATGCAGGggcataaaaaatacaaaaagaagaATTTTTGTCCTGTCAAAATGATGTCTCCCTCTAAAGGATTGGACAACAGGGTGTTCAGCAGTTATGAACATTTTATGACCATCATAGAAATgatgtagggctgggcaattgTTCGAAAAGAACAAGGGTTGGCGTGGATGGAGGTGACGTATCCCTAGCTGTAGCCACTGATTATTGAATTGTCACAACCAGGgtttaatttgtgccggaacactctggatccggcacctctgaaatatGAATcaggcacctcattttaccgatccccctcatCAACTCGACTCCCCAGCCCTCTCCACTTTCGCCTGCTACAACCCCCTTCTCTCAGCTTTTTGTGCGAGACACCTGTCCCTCCAccgggtaacatgccggatccgttcCACCGATTTGTTCTGTGACCCCGCAATTTACAAATTAGGCCCTGGTCACAACCAACAGTGTATTCCCCTCCAAAAAAATGCTTTGTCAAgtcactaaagcctggtttatacttctgcgtcgagtgatcggagtaacccacggcgcatgcaatgcacGTAGCCGTGCATTCATACTATTGCATGCTGTtgctgttgctctgcaataccacttccgaaacgctaggtGGCAGTAAGTTGTTTATGTTCCTCTATATCAAGTTTCTTCTCTGGTGTTTTGtatttctgaacgcttccttaatgtacaagtggctcaaactcgctcattttggggcaggaaccggcggacgtgcaacaactttgaccataagttaaacacaaaacaaaactttccatccggtgCTCCTTcaagggactccacacttgtaaacaatcgctccatcaggctcgcgcgGTTCTTgttcccgcccacactcgtcaacgATAATaagccgactaatcacagagcttgcgttatGCATTGTTGCGACTGAAGTATGAGAGACCAGGAAAAACGgtaatgttggcaggtatggtcatCAGTTGTATTCTACTGGGTGACAAtgttcactcaatgttctataaATCATAGACTAATCTACAATGGTTTTATAAACAGAACACTATAGCCGGAAGTTTGGTGCAAGAAAACATGGTGAACTTTAgaataaactttaaaatgtgtATGACCTCTTGAAACATGCCTGCACTGCCTTTTATTTGCATCCGTTGAGTTGAATGCTCTTTTACGACGTGAATGGACATGTTTGCTTAAGAAAACAAAGAGTAACTGGTGTGATTCTCAGCATTCTCCTACAAGGCTGTCAAGTGGTTACCAGTGTGCGAATTATGCAAGACAATGGGGGATCTGTAATGTTAGTGTTTACATCTGAATTATTCAGTAATCTTATTTCGGTTTTCAGTGTTGTGAATGATATTGAGTGTTTTTTGTAAAGTAAATAGGTTTTGTGCAAGGTGTTATTTCTTtgttatatacactacctgacaccactcttgttgttgatcccacctgtaagagcaataaataataactt

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-141216-202 No description available

Ensembl:

ensembl_id ENSDARG00000101823

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00070485 True 4850 mRNA 0.48 10 47726919 47751940

Neighbor

gene id symbol gene type direction distance location
XLOC_035982 dpp9 coding upstream 3375 47677208 ~ 47723544 (+)
XLOC_035983 CU499311.1 coding upstream 28449 47698098 ~ 47698470 (+)
XLOC_035981 si:ch211-251b21.1 coding upstream 61893 47633438 ~ 47665026 (+)
XLOC_035980 plch2a coding upstream 104387 47342586 ~ 47622532 (+)
XLOC_035979 NA coding upstream 467109 47256108 ~ 47259810 (+)
XLOC_035985 ndufa7 coding downstream 52344 47804284 ~ 47811955 (+)
XLOC_035986 pimr185 coding downstream 65514 47817454 ~ 47819452 (+)
XLOC_035987 plod1a coding downstream 98133 47850073 ~ 47895817 (+)
XLOC_035988 mfn2 coding downstream 145794 47897734 ~ 47948903 (+)
XLOC_035989 NA coding downstream 265711 48017651 ~ 48018967 (+)
XLOC_035976 CR792439.1 non-coding upstream 567886 47154662 ~ 47159033 (+)
XLOC_035974 BX000472.1 non-coding upstream 654582 47072220 ~ 47072337 (+)
XLOC_035973 BX000472.2 non-coding upstream 666404 47060401 ~ 47060515 (+)
XLOC_035971 FO704898.1 non-coding upstream 960374 46766429 ~ 46766545 (+)
XLOC_035991 CR381598.1 non-coding downstream 423368 48175308 ~ 48175423 (+)
XLOC_035992 NA non-coding downstream 635632 48387572 ~ 48390135 (+)
XLOC_035993 CABZ01070222.1 non-coding downstream 638622 48390562 ~ 48390678 (+)
XLOC_035995 BX649478.1 non-coding downstream 762611 48514551 ~ 48527546 (+)

Expression


Co-expression Network