XLOC_035997 (nppal)


Basic Information

Item Value
gene id XLOC_035997
gene name nppal
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 48603398 ~ 48604351 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00070501
GGGTATACGAGGAAAGGCAGAACGGAGACGCGCACGAGCCACCACAGACGAGTGCTGACCTAcagaataacaataaaacaaaaatgatcgcCAACATCTCTGTTTTCTGCGTGTCCTCGCTTCTGCTTTTAAACTTGGTCGGCGCCAAACCAGTTTCCAGTTTACAGAGTCTAAAGCAGCTGTTAGATGAAGAAGTGAACAAGCCGTTTGAGGAGTCCCAGGAGTCGGTGATGGAGCAGAAGGATGCTACAGCTGAGAAGAGCGCGCTGGACGAGCGAGCGGAGCAACTGTGGGAGTCGGACGCGCGAAACTCCGCGCTGGCGGGGAAGTATGGCATGTTCGAGCGTCTCCTAGGCGACTTACTGTCCACATCAAAGCGCTCGTGGAGTCGATTCAAGAAGGGCGACCTGAGGAGCTGCTTTGGGGTCAGACTCGAAAGAATCGGGTCTTTTAGCGGGCTCGGGTGTTAAGCTGAGGTATGTTAGGAGATGTTAGTTCACCTTGAAGGAAACTGTTCAAAAggctttttagaaataaaataagtcatgTCTTATTACTTCATGTCATGTCGCTTCTTGCAGGCTGGGACTTGAAAAACTTGACACATTTGGGCAGGCacatatttgataaaaaaaagtgcTGCAAGTTTTAGATTTGTGTTGAGGTGATGATGATGTAGGCCTATGTGTTGGTCATTATTTATTTGAGATTCAGACCTGTAAATAGTTTGTATTTGAACATTCCatggctgctgctgctgctgctgatgatgatgatgatgaagcttTGTActgttgcatatttatttatttatgtcctcTTTAAATCCACCCGTGTAATAGATCATGTATATTGCTGCACAATAAATTTTTTGCATAACGTGTGT

Function

symbol description
nppal Predicted to enable hormone activity and hormone receptor binding activity. Predicted to be located in extracellular region. Human ortholog(s) of this gene implicated in hypertension. Orthologous to human NPPC (natriuretic peptide C).

GO:

id name namespace
GO:0005576 extracellular region cellular_component
GO:0051427 hormone receptor binding molecular_function
GO:0005179 hormone activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-081022-175 Predicted to enable hormone activity and hormone receptor binding activity. Predicted to be located in extracellular region. Human ortholog(s) of this gene implicated in hypertension. Orthologous to human NPPC (natriuretic peptide C).

Ensembl:

ensembl_id ENSDARG00000052948

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00070501 True 886 mRNA 0.45 2 48603398 48604351

Neighbor

gene id symbol gene type direction distance location
XLOC_035996 si:ch211-215j19.12 coding upstream 38982 48558100 ~ 48564416 (+)
XLOC_035994 si:ch211-263k4.2 coding upstream 61441 48480529 ~ 48541957 (+)
XLOC_035995 BX649478.1 coding upstream 75852 48514551 ~ 48527546 (+)
XLOC_035993 CABZ01070222.1 coding upstream 212720 48390562 ~ 48390678 (+)
XLOC_035992 NA coding upstream 213263 48387572 ~ 48390135 (+)
XLOC_035998 nppb coding downstream 5170 48609521 ~ 48610544 (+)
XLOC_035999 nppa coding downstream 8689 48613040 ~ 48617664 (+)
XLOC_036000 BX323876.1 coding downstream 87118 48691469 ~ 48693254 (+)
XLOC_036001 NA coding downstream 127098 48731449 ~ 48746643 (+)
XLOC_036002 NA coding downstream 145902 48750253 ~ 48752276 (+)
XLOC_035991 CR381598.1 non-coding upstream 427975 48175308 ~ 48175423 (+)
XLOC_035989 NA non-coding upstream 584431 48017651 ~ 48018967 (+)
XLOC_036005 NA non-coding downstream 305956 48910307 ~ 48910828 (+)
XLOC_036008 NA non-coding downstream 456650 49061001 ~ 49063846 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000050_06302230_06302696 NA coding CI01000050 null 6301735 ~ 6302764 (+)