XLOC_036614


Basic Information

Item Value
gene id XLOC_036614
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 37966148 ~ 37966860 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00072072
CTGTGCAGCTAAAGTTTAATCCTTTCACTCCTGAAGTTCGTTTGGTGTTTTAAGTTTTTCAAGTGTTAGTGCATGACCATAAAACTAAATATCAATACACTTTGGAAAGAAGTTCCAGTCTCCTCATTTGTTGTGTCCTGACCGACACCCAGGATTGTTTGCTGAACATAATTTGAACTAGAGCCTAGCAGTTTCCTTTCCTCTCCAACAAActggtccttcgagccggataTAGCATTCATTCCTGATATTATGGAGTCTGATGA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00072072 True 266 lncRNA 0.40 2 37966148 37966860

Neighbor

gene id symbol gene type direction distance location
XLOC_036613 eif2d coding downstream 504313 37447606 ~ 37461835 (-)
XLOC_036612 slc12a5b coding downstream 574776 37280532 ~ 37391372 (-)
XLOC_036611 rh50 coding downstream 702624 37259398 ~ 37263524 (-)
XLOC_036610 rbm39b coding downstream 716157 37228611 ~ 37249991 (-)
XLOC_036609 zgc:162200 coding downstream 860922 37058899 ~ 37105226 (-)
XLOC_036615 rab11fip1a coding upstream 31527 37998387 ~ 38022298 (-)
XLOC_036616 adgra2 coding upstream 59823 38026683 ~ 38159805 (-)
XLOC_036617 pdlim2 coding upstream 223373 38190233 ~ 38317914 (-)
XLOC_036618 sorbs3 coding upstream 351497 38318357 ~ 38403018 (-)
XLOC_036619 sorbs3 coding upstream 438256 38405116 ~ 38406868 (-)
XLOC_036604 NA non-coding downstream 982987 36732916 ~ 36983161 (-)
XLOC_036606 NA non-coding downstream 988142 36976998 ~ 36978006 (-)
XLOC_036605 NA non-coding downstream 1167443 36794501 ~ 36798705 (-)
XLOC_036601 CU694380.2 non-coding downstream 1424292 36528233 ~ 36541856 (-)
XLOC_036590 NA non-coding downstream 2185461 35766632 ~ 35780687 (-)
XLOC_036622 NA non-coding upstream 619193 38586053 ~ 38587434 (-)
XLOC_036624 CR628410.1 non-coding upstream 657295 38624155 ~ 38631651 (-)
XLOC_036626 CR392001.2 non-coding upstream 971430 38938290 ~ 38938960 (-)
XLOC_036628 NA non-coding upstream 1164939 39131799 ~ 39132638 (-)
XLOC_036629 NA non-coding upstream 1308342 39275202 ~ 39292674 (-)

Expression


Co-expression Network